Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
AMBRA1Q9C0C7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 MTND5P3-201ENST00000438536 1800 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 XIAPP3-201ENST00000312918 795 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 Y_RNA.100-201ENST00000363141 102 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 SNORA23-201ENST00000365128 182 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 MIR554-201ENST00000384874 96 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 MIR708-201ENST00000390708 88 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 RNA5SP36-201ENST00000410197 133 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 RAC1P3-201ENST00000416129 580 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AL645937.1-202ENST00000421799 937 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC093106.2-201ENST00000428212 385 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 RNU7-180P-201ENST00000459240 63 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 TTC39CP1-201ENST00000512513 755 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 RNU4-49P-201ENST00000516080 140 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 RNA5SP143-201ENST00000516936 115 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 IGLVIV-65-201ENST00000517313 360 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC105029.1-201ENST00000520250 669 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 MRPL49P2-201ENST00000521066 465 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 MTND4P7-201ENST00000523876 130 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC093012.1-202ENST00000549403 582 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC034105.4-201ENST00000568304 277 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC016727.1-205ENST00000605437 569 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC135507.2-201ENST00000612443 309 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AC004696.1-201ENST00000614345 607 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 AL136964.1-201ENST00000622038 2990 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 API5P2-201ENST00000397055 1498 ntBASIC3.86□□□□□ -1.79
AMBRA1Q9C0C7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AL645937.1-201ENST00000641739 1652 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNU4-79P-201ENST00000362764 141 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 SNORA51.2-201ENST00000364595 132 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AL359634.1-202ENST00000404721 284 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 TXNP7-201ENST00000406296 293 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 SNORA11.1-201ENST00000408133 129 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNU2-43P-201ENST00000410306 190 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 SSXP9-201ENST00000417503 292 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 ARL5AP1-201ENST00000418991 388 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RPS12P23-201ENST00000419579 400 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 PHBP16-201ENST00000446318 950 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 MRPL50P4-201ENST00000446432 475 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AL590639.1-201ENST00000456484 337 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNU6-329P-201ENST00000459618 107 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC103851.1-201ENST00000506833 274 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC104806.1-201ENST00000508720 308 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNU6-390P-201ENST00000516259 103 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AC005668.1-201ENST00000571142 476 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 RNA5SP108-201ENST00000605921 117 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 uc_338.5-201ENST00000611839 155 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 AP003400.5-201ENST00000624827 617 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 TPTEP1-208ENST00000636884 213 ntBASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
AMBRA1Q9C0C7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
AMBRA1Q9C0C7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AMBRA1Q9C0C7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
AMBRA1Q9C0C7 RNA5SP502-201ENST00000362694 119 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms