Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 RNU4-65P-201ENST00000410473 140 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 RNU4-25P-201ENST00000410569 230 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 RN7SKP106-201ENST00000410832 272 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 UBE2FP1-201ENST00000416536 447 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 snoU13.1-201ENST00000459157 104 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 MTATP8P1-201ENST00000467115 207 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 HMGB1P25-201ENST00000468402 607 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AP002812.1-201ENST00000495378 474 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC116337.1-201ENST00000509680 687 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC015795.1-201ENST00000513669 327 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 RNU6-1069P-201ENST00000516612 133 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 CR383656.7-201ENST00000548164 174 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 MIR3941-201ENST00000582572 103 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 MIR5692C1-201ENST00000585309 91 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AL138889.2-201ENST00000603883 242 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 ATP1B3P1-201ENST00000605365 821 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 U2.17-201ENST00000611454 95 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC083809.1-201ENST00000615051 472 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 MIR6853-201ENST00000619642 74 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 Z69720.2-201ENST00000624755 279 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AC027287.1-201ENST00000553115 1453 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC087190.4-201ENST00000574616 8334 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AL049555.1-201ENST00000562834 1933 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AL590240.1-201ENST00000334118 313 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.47-201ENST00000362697 108 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 RNU6-128P-201ENST00000383976 107 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 RNU1-44P-201ENST00000384453 163 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.557-201ENST00000384680 107 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 RNU1-82P-201ENST00000390851 165 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 SNORA16.2-201ENST00000390991 127 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 SNORD70.1-201ENST00000391007 85 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 MIR1302-3-201ENST00000408128 138 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.618-201ENST00000410949 107 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 HMGB3P2-201ENST00000411913 584 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 RPLP0P7-201ENST00000416050 667 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AL139095.3-201ENST00000419672 1203 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 NRBF2P3-201ENST00000432731 865 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC005154.2-201ENST00000438110 379 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 RPL23AP33-201ENST00000442301 452 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 GAPDHP27-201ENST00000447427 1020 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ISCUP1-201ENST00000454451 448 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC010326.1-201ENST00000462726 602 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 PPIAP21-201ENST00000464473 501 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 TRBV1-201ENST00000476502 284 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 SNORA14.1-201ENST00000516113 141 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 RN7SKP92-201ENST00000517266 244 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 IGKV1-32-201ENST00000519290 311 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 MTCO3P23-201ENST00000561363 289 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AC007485.1-201ENST00000616755 206 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 AL592437.2-201ENST00000421655 2434 ntBASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXP3Q9BZS1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 MTCO1P24-201ENST00000515438 1558 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 AC022893.2-201ENST00000564832 3296 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 Y_RNA.364-201ENST00000365532 101 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 RN7SKP267-201ENST00000410381 285 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 RPL23AP69-201ENST00000431134 458 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 RNU7-167P-201ENST00000459160 62 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 AC008481.1-201ENST00000463278 396 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 SCARNA22-201ENST00000503991 125 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 PPBPP1-201ENST00000510807 373 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.71□□□□□ -1.66
FOXP3Q9BZS1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms