Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 SNORD81.2-201ENST00000365153 76 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 RNU6-744P-201ENST00000365557 107 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 RNU6-1316P-201ENST00000384242 108 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 MIR634-201ENST00000385208 97 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 EIF5P1-201ENST00000400019 1231 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 OR9R1P-201ENST00000412200 877 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 PRELID3BP11-201ENST00000414230 479 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AL158071.1-201ENST00000430315 461 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 USP9YP15-201ENST00000442391 422 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 RPS26P56-201ENST00000444468 240 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 RPL21P23-201ENST00000446654 460 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AP001025.2-201ENST00000490908 477 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 HMGN1P11-201ENST00000508668 303 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC037471.2-201ENST00000564941 598 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 MIR3118-1-201ENST00000581787 76 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC121334.2-201ENST00000605387 271 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AL050343.2-201ENST00000607338 280 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.812-201ENST00000610788 101 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AL132765.2-201ENST00000610812 351 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.784-201ENST00000613803 101 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.787-201ENST00000616522 101 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.780-201ENST00000617336 101 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.801-201ENST00000619005 101 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 AC092447.10-201ENST00000620607 1652 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SALL3Q9BXA9 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.23□□□□□ -1.73
SALL3Q9BXA9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 OR5J1P-201ENST00000313544 939 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 RNU6-108P-201ENST00000365558 107 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AL023807.1-201ENST00000407932 359 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC078974.1-201ENST00000411597 223 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 RAC1P3-201ENST00000416129 580 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AF228730.4-201ENST00000421457 183 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 FTH1P6-201ENST00000430768 320 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AL645939.1-201ENST00000453429 797 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AP1S2P1-201ENST00000457344 379 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 MTCO2P29-201ENST00000465212 189 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AP000926.1-201ENST00000479573 241 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 RPL21P13-201ENST00000488305 481 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC093278.1-201ENST00000494700 600 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC110768.1-201ENST00000509222 400 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 SNORA19.2-201ENST00000516013 114 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC007458.1-201ENST00000542812 373 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 LARP7P2-201ENST00000575306 125 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AL161756.2-201ENST00000604597 246 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 RNVU1-4-201ENST00000612985 164 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AC024940.5-201ENST00000622889 474 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AL034408.1-202ENST00000636088 415 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SALL3Q9BXA9 AL513302.2-201ENST00000562313 1842 ntBASIC4.22□□□□□ -1.73
SALL3Q9BXA9 RNU5E-1-201ENST00000362477 120 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 SNORA63.1-201ENST00000362493 131 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 RNU4-35P-201ENST00000362588 141 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.162-201ENST00000363683 102 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 RNU4-1-201ENST00000363925 141 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 SNORA69-201ENST00000383895 132 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 RN7SKP32-201ENST00000410167 303 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 RN7SKP177-201ENST00000410567 355 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AL359704.1-201ENST00000411586 781 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 PDCL2P1-201ENST00000419302 352 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 ELOCP4-201ENST00000420090 333 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SALL3Q9BXA9 NDUFA5P4-201ENST00000436704 385 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 HSPE1P28-201ENST00000443139 211 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 CBWD4P-201ENST00000445695 655 ntBASIC4.21□□□□□ -1.73
SALL3Q9BXA9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms