Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
VRK1Q99986 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VRK1Q99986 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
VRK1Q99986 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.92□□□□□ -1.78
VRK1Q99986 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VRK1Q99986 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
VRK1Q99986 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VRK1Q99986 OR56B2P-202ENST00000641377 2453 ntBASIC3.92□□□□□ -1.78
VRK1Q99986 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 AC126755.2-208ENST00000327792 462 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AC138969.1-213ENST00000331436 462 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 Y_RNA.11-201ENST00000362375 109 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 RNU6-1127P-201ENST00000384580 107 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 RNA5SP39-201ENST00000411245 120 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 BX323014.1-201ENST00000412876 237 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK1Q99986 RAD17P1-201ENST00000418130 2042 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 AL590639.1-201ENST00000456484 337 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 SCARNA18-201ENST00000459004 134 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 RPS20P22-201ENST00000473700 357 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 FGF7P4-201ENST00000509595 295 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK1Q99986 AC022690.1-201ENST00000526681 550 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.91□□□□□ -1.78
VRK1Q99986 RPL23AP87-202ENST00000573039 466 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AC021646.1-201ENST00000605469 484 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 AC092807.2-201ENST00000609367 243 ntBASIC3.91□□□□□ -1.78
VRK1Q99986 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.91□□□□□ -1.78
VRK1Q99986 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VRK1Q99986 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VRK1Q99986 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK1Q99986 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK1Q99986 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK1Q99986 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.78
VRK1Q99986 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK1Q99986 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK1Q99986 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
VRK1Q99986 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VRK1Q99986 AC021146.4-201ENST00000309229 279 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 RNU6-288P-201ENST00000363690 104 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 Y_RNA.167-201ENST00000363735 109 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 Y_RNA.378-201ENST00000365652 113 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 Y_RNA.399-201ENST00000383955 105 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 Y_RNA.530-201ENST00000384587 101 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 ARL4AP5-201ENST00000404372 599 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 RNA5SP111-201ENST00000411386 101 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.9□□□□□ -1.79
VRK1Q99986 MTND3P8-201ENST00000412909 339 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK1Q99986 RPL7AP25-201ENST00000423357 805 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AL365400.1-201ENST00000431854 640 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 RPS15AP27-201ENST00000449183 343 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AP001086.1-201ENST00000494882 321 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK1Q99986 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK1Q99986 APOOP4-201ENST00000513530 597 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 SNORA70.16-201ENST00000516390 95 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 RN7SKP256-201ENST00000517201 314 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 BTF3P12-201ENST00000519620 469 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.9□□□□□ -1.79
VRK1Q99986 RPL7P20-201ENST00000520308 745 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 TOMM20P2-201ENST00000540082 421 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 OR11H5P-201ENST00000554039 926 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 MTCO3P23-201ENST00000561363 289 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 MIR5583-1-201ENST00000580941 59 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AC002545.1-201ENST00000592511 181 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.9□□□□□ -1.79
VRK1Q99986 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK1Q99986 C2orf27A-204ENST00000623058 969 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 AL359697.1-201ENST00000624879 587 ntBASIC3.9□□□□□ -1.79
VRK1Q99986 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VRK1Q99986 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VRK1Q99986 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VRK1Q99986 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
VRK1Q99986 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.89□□□□□ -1.79
VRK1Q99986 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VRK1Q99986 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 Y_RNA.373-201ENST00000365600 103 ntBASIC3.89□□□□□ -1.79
VRK1Q99986 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VRK1Q99986 SNORA32.2-201ENST00000384049 122 ntBASIC3.89□□□□□ -1.79
VRK1Q99986 CISD1P1-201ENST00000393907 327 ntBASIC3.89□□□□□ -1.79
VRK1Q99986 AL590704.1-201ENST00000402856 794 ntBASIC3.89□□□□□ -1.79
VRK1Q99986 RNU2-71P-201ENST00000411395 189 ntBASIC3.89□□□□□ -1.79
VRK1Q99986 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms