Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX3Q99909 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX3Q99909 AC146507.2-201ENST00000460608 476 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX3Q99909 AC025881.1-201ENST00000518851 512 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 DEFB108A-201ENST00000530110 222 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC123904.3-201ENST00000547218 814 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX3Q99909 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX3Q99909 AL356432.3-201ENST00000568952 465 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC006504.3-201ENST00000586818 523 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC002545.1-201ENST00000592511 181 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 WISP1-OT1-201ENST00000602893 642 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AP001981.2-201ENST00000603241 418 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 SRGNP1-201ENST00000603392 451 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AL035413.2-201ENST00000604801 525 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC131902.3-201ENST00000611767 581 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 UCA1.1-201ENST00000620952 75 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC084035.1-201ENST00000634543 607 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX3Q99909 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SSX3Q99909 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RNU1-105P-201ENST00000363470 161 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RNA5SP42-201ENST00000364278 115 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RNU6-533P-201ENST00000384144 107 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 MIR34B-201ENST00000385076 84 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AF228730.1-201ENST00000397972 663 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RPL7P25-201ENST00000404151 721 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL513331.1-201ENST00000411908 397 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 DBIP2-201ENST00000419076 262 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL451054.2-201ENST00000420896 202 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 Z99497.1-201ENST00000421282 135 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL365496.1-201ENST00000426885 215 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 OR2AS1P-201ENST00000427827 319 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 MED14P1-201ENST00000430517 648 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX3Q99909 CETN4P-201ENST00000432407 469 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AC005094.1-201ENST00000440420 368 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 MTND1P30-201ENST00000441241 901 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX3Q99909 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX3Q99909 RPL21P10-201ENST00000463521 490 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AC023598.1-201ENST00000472521 361 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AC010631.1-201ENST00000474150 156 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX3Q99909 AC112204.1-201ENST00000502591 103 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 OR5BM1P-201ENST00000512021 366 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RNU2-27P-201ENST00000516185 142 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 RNU6-201P-201ENST00000517100 61 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.85□□□□□ -1.95
SSX3Q99909 AP006245.1-201ENST00000522549 120 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX3Q99909 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.85□□□□□ -1.95
SSX3Q99909 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX3Q99909 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
SSX3Q99909 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.85□□□□□ -1.95
SSX3Q99909 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX3Q99909 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 AL606834.2-201ENST00000602954 668 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AC099506.2-201ENST00000623074 221 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AC097520.1-201ENST00000624435 385 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 AL136313.1-201ENST00000624804 202 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX3Q99909 U6.105-201ENST00000637379 88 ntBASIC2.85□□□□□ -1.95
SSX3Q99909 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.85□□□□□ -1.95
SSX3Q99909 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SSX3Q99909 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSX3Q99909 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSX3Q99909 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SSX3Q99909 SNORD56.5-201ENST00000364281 72 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SSX3Q99909 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SSX3Q99909 RNU6-741P-201ENST00000383889 107 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.84□□□□□ -1.95
SSX3Q99909 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX3Q99909 AL159987.2-201ENST00000432754 307 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 TIMM9P1-201ENST00000436122 256 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 Z82210.1-201ENST00000440037 231 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.84□□□□□ -1.95
SSX3Q99909 BNIP3P2-201ENST00000441221 577 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.84□□□□□ -1.95
SSX3Q99909 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.84□□□□□ -1.95
SSX3Q99909 KATNBL1P6-201ENST00000453433 915 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms