Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC073114.1-201ENST00000612027 490 ntBASIC3.12□□□□□ -1.91
CPNE1Q99829 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.12□□□□□ -1.91
CPNE1Q99829 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CPNE1Q99829 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.12□□□□□ -1.91
CPNE1Q99829 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CPNE1Q99829 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CPNE1Q99829 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.12□□□□□ -1.91
CPNE1Q99829 ELL2P3-201ENST00000457883 1602 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CPNE1Q99829 MTND5P19-201ENST00000424872 1794 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 RNY3P13-201ENST00000365542 102 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 RNY3P10-201ENST00000384764 102 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.11□□□□□ -1.91
CPNE1Q99829 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.11□□□□□ -1.91
CPNE1Q99829 AC093156.1-201ENST00000440382 670 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CPNE1Q99829 MTND2P4-201ENST00000445034 1004 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC016696.1-201ENST00000446949 318 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 PDSS1P2-201ENST00000449397 678 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC009961.3-201ENST00000449832 765 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 RNA5SP269-201ENST00000459032 137 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC008155.2-201ENST00000464337 397 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 TTC39CP1-201ENST00000512513 755 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.11□□□□□ -1.91
CPNE1Q99829 AC023632.4-201ENST00000517783 191 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AP003467.2-201ENST00000520175 319 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.11□□□□□ -1.91
CPNE1Q99829 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.11□□□□□ -1.91
CPNE1Q99829 AL163153.1-201ENST00000554223 283 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 MIR3118-1-201ENST00000581787 76 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC002545.1-201ENST00000592511 181 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.11□□□□□ -1.91
CPNE1Q99829 AC108479.2-201ENST00000617314 601 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 AC091953.2-201ENST00000623979 160 ntBASIC3.11□□□□□ -1.91
CPNE1Q99829 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
CPNE1Q99829 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CPNE1Q99829 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CPNE1Q99829 FGF7P2-201ENST00000332473 296 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 U3.4-201ENST00000363352 213 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 RNY4P16-201ENST00000364768 94 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CPNE1Q99829 RNU6-741P-201ENST00000383889 107 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 MRPL42P2-201ENST00000403169 426 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 TAF9P1-201ENST00000445421 515 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 MTATP6P26-201ENST00000445926 662 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC020550.1-201ENST00000447385 163 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 SSXP1-201ENST00000453640 473 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 TAF9P2-201ENST00000454958 515 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 MTND1P12-201ENST00000455231 147 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 RPS20P22-201ENST00000473700 357 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 HMGN2P13-201ENST00000476476 274 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CPNE1Q99829 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.1□□□□□ -1.91
CPNE1Q99829 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 RPL21P5-201ENST00000554662 472 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
CPNE1Q99829 BNIP3P8-201ENST00000597863 560 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC110760.3-201ENST00000598794 467 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.1□□□□□ -1.91
CPNE1Q99829 AL138880.2-201ENST00000616214 239 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC138932.5-201ENST00000617759 563 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CPNE1Q99829 AC099654.13-201ENST00000639774 207 ntBASIC3.1□□□□□ -1.91
CPNE1Q99829 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
CPNE1Q99829 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CPNE1Q99829 FAM35BP-202ENST00000497389 3337 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CPNE1Q99829 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC007785.2-201ENST00000598627 1916 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AL353743.1-202ENST00000431724 1695 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CPNE1Q99829 SNORD116-2-201ENST00000384274 95 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 SNORD116-6-201ENST00000384711 96 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AL357075.1-201ENST00000404107 726 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms