Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CIR1P3-201ENST00000405137 479 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC068533.1-201ENST00000418542 415 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.56□□□□□ -1.84
NPAS1Q99742 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.56□□□□□ -1.84
NPAS1Q99742 DDX3P2-201ENST00000446138 111 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC020550.1-201ENST00000447385 163 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 MTND1P18-201ENST00000448191 573 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.56□□□□□ -1.84
NPAS1Q99742 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 RPS29P15-201ENST00000458329 171 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 RNU6-953P-201ENST00000459154 107 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC108078.2-201ENST00000510750 236 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 AC104383.1-201ENST00000530297 370 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 AL157687.1-201ENST00000554853 619 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 VN1R85P-201ENST00000601587 426 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AL592436.1-201ENST00000605135 558 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AP001330.5-201ENST00000607176 411 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC093788.1-201ENST00000609356 927 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC012531.5-201ENST00000611375 151 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.56□□□□□ -1.84
NPAS1Q99742 AC025034.2-201ENST00000623264 286 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.56□□□□□ -1.84
NPAS1Q99742 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.56□□□□□ -1.84
NPAS1Q99742 MIR3688-2-201ENST00000636963 87 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NPAS1Q99742 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPAS1Q99742 SDAD1P2-201ENST00000441308 2028 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NPAS1Q99742 AF117829.1-206ENST00000621883 3802 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 NCAPGP1-201ENST00000505112 1814 ntBASIC3.56□□□□□ -1.84
NPAS1Q99742 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NPAS1Q99742 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RN7SKP227-201ENST00000364445 330 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 SMIM11P1-201ENST00000369586 178 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RNU6-877P-201ENST00000383868 107 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RNU6-213P-201ENST00000384051 104 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 SNORA24.1-201ENST00000384401 135 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 MIR1277-201ENST00000408536 78 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RNU6-628P-201ENST00000410675 107 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
NPAS1Q99742 HMGB3P20-201ENST00000417997 600 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 ATP5JP1-201ENST00000431631 322 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RPL36AP6-201ENST00000435770 321 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS1Q99742 CEACAMP4-201ENST00000457676 421 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RN7SL93P-201ENST00000463035 293 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 MRPS17P3-201ENST00000465453 385 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NPAS1Q99742 RPL36AP51-201ENST00000487216 318 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AP001086.1-201ENST00000494882 321 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 BTF3L4P4-201ENST00000506381 449 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 SNORA70.16-201ENST00000516390 95 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RNU6-1256P-201ENST00000516539 103 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 RNA5SP503-201ENST00000517047 117 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 MIR2116-201ENST00000517221 80 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AP006587.4-201ENST00000526053 529 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC092325.1-201ENST00000566449 554 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.55□□□□□ -1.84
NPAS1Q99742 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS1Q99742 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC007687.1-201ENST00000602704 304 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AL162413.1-201ENST00000603198 110 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AL606490.9-201ENST00000603331 271 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC010591.1-201ENST00000603941 649 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC092628.2-201ENST00000622492 339 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 FP236240.3-201ENST00000623061 327 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 AC093648.1-201ENST00000623546 606 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC244205.2-202ENST00000635781 342 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 MIR1321-201ENST00000637766 79 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.55□□□□□ -1.84
NPAS1Q99742 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.55□□□□□ -1.84
NPAS1Q99742 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NPAS1Q99742 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms