Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.2□□□□□ -2.06
VAT1Q99536 AC007785.2-201ENST00000598627 1916 ntBASIC2.2□□□□□ -2.06
VAT1Q99536 MTND5P6-201ENST00000422338 1798 ntBASIC2.2□□□□□ -2.06
VAT1Q99536 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VAT1Q99536 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAT1Q99536 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.2□□□□□ -2.06
VAT1Q99536 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VAT1Q99536 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
VAT1Q99536 RNU6-216P-201ENST00000363282 104 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 SNORD65.1-201ENST00000390889 71 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AL135786.1-201ENST00000415892 214 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.19□□□□□ -2.06
VAT1Q99536 PPP1R11P2-201ENST00000423543 382 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AL358075.3-201ENST00000426289 226 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 DPRXP1-201ENST00000426312 460 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.19□□□□□ -2.06
VAT1Q99536 BMI1P1-201ENST00000445879 941 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 COL6A4P2-205ENST00000509855 506 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AC113155.1-201ENST00000511141 769 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
VAT1Q99536 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 SUB1P1-201ENST00000524415 382 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AP002748.2-201ENST00000528671 348 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.19□□□□□ -2.06
VAT1Q99536 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.19□□□□□ -2.06
VAT1Q99536 AC124947.2-202ENST00000552735 133 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AL512506.1-201ENST00000613918 449 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AC253576.2-201ENST00000618815 580 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 AL596245.1-201ENST00000618994 362 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 MIR1322-201ENST00000638013 71 ntBASIC2.19□□□□□ -2.06
VAT1Q99536 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
VAT1Q99536 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.19□□□□□ -2.06
VAT1Q99536 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
VAT1Q99536 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VAT1Q99536 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VAT1Q99536 AL022578.1-201ENST00000439330 1433 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VAT1Q99536 RNU4-82P-201ENST00000362443 140 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VAT1Q99536 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VAT1Q99536 DHFRP6-201ENST00000401776 268 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AL445687.1-201ENST00000439946 251 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.18□□□□□ -2.06
VAT1Q99536 FGF7P5-201ENST00000441829 291 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 DPPA3P1-201ENST00000448050 469 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.18□□□□□ -2.06
VAT1Q99536 AC093677.1-201ENST00000514414 678 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.18□□□□□ -2.06
VAT1Q99536 AC087808.1-201ENST00000520501 361 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 MTCO3P15-201ENST00000526563 574 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AL132857.1-201ENST00000555180 708 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.18□□□□□ -2.06
VAT1Q99536 MIR3117-201ENST00000584034 78 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.18□□□□□ -2.06
VAT1Q99536 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.18□□□□□ -2.06
VAT1Q99536 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.18□□□□□ -2.06
VAT1Q99536 AC005498.1-201ENST00000592125 465 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 VN1R78P-201ENST00000597393 564 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.18□□□□□ -2.06
VAT1Q99536 MIR6130-201ENST00000619419 109 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AC008443.7-201ENST00000622195 246 ntBASIC2.18□□□□□ -2.06
VAT1Q99536 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.18□□□□□ -2.06
VAT1Q99536 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
VAT1Q99536 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VAT1Q99536 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VAT1Q99536 ANKRD36P1-201ENST00000344424 659 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 Y_RNA.548-201ENST00000384656 105 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 RNU6-1072P-201ENST00000384703 107 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 RNU6-443P-201ENST00000384780 107 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 BTF3P8-201ENST00000414577 526 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC092047.1-201ENST00000424997 240 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 MTCO3P30-201ENST00000426425 670 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 WARS2P1-201ENST00000429678 537 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.17□□□□□ -2.06
VAT1Q99536 EIF4EP3-201ENST00000498782 656 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 GTF2IP9-201ENST00000502460 301 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 SUMO2P6-201ENST00000505273 288 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 RNU6-528P-201ENST00000516926 100 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 RNA5SP471-201ENST00000516971 106 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.17□□□□□ -2.06
VAT1Q99536 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.17□□□□□ -2.06
VAT1Q99536 AC022861.1-201ENST00000522981 663 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AP003049.1-201ENST00000529418 457 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.17□□□□□ -2.06
VAT1Q99536 AL445435.1-201ENST00000604232 665 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC103710.4-201ENST00000609301 899 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC005332.6-201ENST00000613178 446 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 AC120349.2-201ENST00000625002 298 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 IGHVIII-44-202ENST00000636235 289 ntBASIC2.17□□□□□ -2.06
VAT1Q99536 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
VAT1Q99536 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
VAT1Q99536 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
VAT1Q99536 SNORA11.4-201ENST00000408823 129 ntBASIC2.16□□□□□ -2.06
VAT1Q99536 Z75741.2-201ENST00000417272 1167 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms