Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RANP9-201ENST00000519957 271 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC009643.1-201ENST00000532030 391 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 NCAPGP2-201ENST00000557911 754 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC005951.1-201ENST00000576706 485 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC103987.3-201ENST00000582071 292 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC091805.2-201ENST00000603848 235 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC104763.2-201ENST00000604179 382 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AL161729.4-201ENST00000604650 476 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AL138880.2-201ENST00000616214 239 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 MTND1P37-201ENST00000636562 264 ntBASIC3.4□□□□□ -1.87
NR1H4Q96RI1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H4Q96RI1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RN7SKP280-201ENST00000364196 304 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 MIR558-201ENST00000384920 94 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RNU6-817P-201ENST00000391083 104 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 SOD2P1-201ENST00000396543 562 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 HMGB3P12-201ENST00000438745 556 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC079781.2-201ENST00000446424 169 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RPS23P7-201ENST00000466210 444 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RPS3AP17-201ENST00000472594 777 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AL132838.2-201ENST00000492041 314 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RNU6-579P-201ENST00000516879 102 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 RNU6-410P-201ENST00000517006 107 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AP006587.4-201ENST00000526053 529 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AL163153.1-201ENST00000554223 283 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 HMGB1P6-201ENST00000569046 646 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 MTND1P15-201ENST00000579262 949 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC068790.4-201ENST00000602474 263 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC008745.1-201ENST00000604064 271 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 NDUFA8P1-201ENST00000605525 367 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC107294.1-201ENST00000609524 467 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC034102.8-201ENST00000615146 484 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC139792.2-201ENST00000624218 587 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 MIR3653-201ENST00000625572 110 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 LRRC77P-213ENST00000637727 880 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AC068137.4-201ENST00000638485 296 ntBASIC3.39□□□□□ -1.87
NR1H4Q96RI1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.39□□□□□ -1.87
NR1H4Q96RI1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNU6-169P-201ENST00000365336 107 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNU6-39P-201ENST00000384344 107 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 Y_RNA.582-201ENST00000391023 95 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNU2-39P-201ENST00000410604 198 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNA5SP38-201ENST00000410750 119 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 MTCO3P41-201ENST00000414801 328 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 MTND4P25-201ENST00000441039 533 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC091167.1-201ENST00000492017 396 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC138853.1-201ENST00000503549 823 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC117522.1-201ENST00000509821 380 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 SNORA31.9-201ENST00000516429 84 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 RNU6-677P-201ENST00000516914 101 ntBASIC3.38□□□□□ -1.87
NR1H4Q96RI1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.38□□□□□ -1.87
NR1H4Q96RI1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms