Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC006539.2-201ENST00000601729 572 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 DPPA3P3-201ENST00000603842 430 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AC105148.1-201ENST00000604961 409 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AC090115.4-201ENST00000609970 188 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AC103710.1-201ENST00000610003 901 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 TUSC7.1-201ENST00000610969 165 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AL359198.2-201ENST00000611836 194 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AC079395.3-201ENST00000615161 484 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AC018692.3-201ENST00000623929 123 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 AC006378.2-201ENST00000623178 2476 ntBASIC2.77□□□□□ -1.97
NSMCE2Q96MF7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 PABPC1P9-201ENST00000426076 1612 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 MIR22-201ENST00000362190 85 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 SNORD113-6-201ENST00000363345 75 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 Y_RNA.245-201ENST00000364493 95 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 Y_RNA.302-201ENST00000364997 102 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL122016.1-201ENST00000403365 367 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 RPL17P12-201ENST00000413391 526 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 MTND1P20-201ENST00000430341 950 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AC091286.1-201ENST00000431233 461 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 SNRPEP9-201ENST00000436794 238 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 RPL39P40-201ENST00000445481 146 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL606517.1-201ENST00000446914 387 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL133547.1-201ENST00000448546 220 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AIG1P1-201ENST00000503376 148 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 NCAPGP2-201ENST00000557911 754 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AL354943.1-201ENST00000572103 781 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AC138761.3-201ENST00000579993 334 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 AC245389.1-201ENST00000605141 529 ntBASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
NSMCE2Q96MF7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RNA5SP515-201ENST00000364570 118 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RNU6-1200P-201ENST00000384162 107 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RNU6-253P-201ENST00000384730 105 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 ANAPC10P1-201ENST00000395991 556 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 ELOCP14-201ENST00000428070 331 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 HMGN2P31-201ENST00000432430 273 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RPS15AP5-201ENST00000436276 388 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 ELOCP7-201ENST00000439968 331 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 Z73417.1-201ENST00000447373 778 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 OR6C5P-201ENST00000452388 923 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RPL23AP70-201ENST00000483361 460 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RN7SKP272-201ENST00000516988 232 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 RN7SKP258-201ENST00000517151 304 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 MTATP6P15-201ENST00000527233 835 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 DEFB108A-201ENST00000530110 222 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL359212.1-201ENST00000556608 614 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC103810.1-201ENST00000579873 453 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 MIR4293-201ENST00000584305 78 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 MIR4999-201ENST00000585029 91 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC004805.2-201ENST00000605382 482 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC013244.3-201ENST00000605614 388 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL355472.4-201ENST00000610233 626 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL050303.3-201ENST00000613704 284 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AC068787.1-201ENST00000623908 691 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 AL136313.1-201ENST00000624804 202 ntBASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
NSMCE2Q96MF7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NSMCE2Q96MF7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NSMCE2Q96MF7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
NSMCE2Q96MF7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms