Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR378C-201ENST00000578683 81 ntBASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 MIR4312-201ENST00000579909 76 ntBASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 AC116165.3-201ENST00000614524 400 ntBASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 AC131009.3-201ENST00000621809 287 ntBASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 AC022164.1-201ENST00000568767 2673 ntBASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 OR5M2P-202ENST00000641241 4242 ntBASIC5.98□□□□□ -1.45
MS4A3Q96HJ5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ADAM3A-203ENST00000461344 2157 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 SNORD114-7-201ENST00000362520 77 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC108075.1-201ENST00000424692 529 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 H2AFZP5-201ENST00000446960 382 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 RPL7AP71-201ENST00000451120 739 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 RPS26P11-201ENST00000463445 348 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 RPS26P6-201ENST00000475156 348 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 RPL23AP80-201ENST00000495605 424 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AP006587.5-201ENST00000532033 739 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC009120.3-201ENST00000563335 499 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC010287.1-201ENST00000566916 357 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 MIR5588-201ENST00000581890 63 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 MRPL57P3-201ENST00000619218 176 ntBASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MS4A3Q96HJ5 AC007114.2-201ENST00000576014 4281 ntBASIC5.96□□□□□ -1.45
MS4A3Q96HJ5 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
MS4A3Q96HJ5 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
MS4A3Q96HJ5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
MS4A3Q96HJ5 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 RNA5SP333-201ENST00000363466 118 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 RNA5SP334-201ENST00000364825 118 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 RNA5SP152-201ENST00000365184 110 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 H3F3BP1-201ENST00000440551 403 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 RN7SL216P-201ENST00000471607 298 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 RN7SL187P-201ENST00000495587 303 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 RN7SKP234-201ENST00000517173 224 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 SNORA31.23-201ENST00000517219 133 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 MIR5010-201ENST00000582846 120 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 MIR3529-201ENST00000637713 78 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 AL359263.1-201ENST00000441188 2796 ntBASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MS4A3Q96HJ5 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms