Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DUXAP4-201ENST00000603046 613 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 U73023.1-201ENST00000603134 700 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL031775.1-201ENST00000607014 887 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL451064.1-201ENST00000607718 471 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC107214.2-201ENST00000608204 634 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 MIR7975-201ENST00000619350 68 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC068880.5-201ENST00000624331 290 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 U6.105-201ENST00000637379 88 ntBASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDLIM5Q96HC4 AC008669.1-201ENST00000565823 2178 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 OR1S2-201ENST00000302592 978 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 U3.4-201ENST00000363352 213 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 RNU6-777P-201ENST00000364265 104 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 RNU4-47P-201ENST00000410876 114 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AP000936.2-201ENST00000447151 681 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 SNORA84-201ENST00000459229 133 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC106872.3-201ENST00000495104 446 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC002545.1-201ENST00000592511 181 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC073544.2-201ENST00000601155 540 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AL161729.4-201ENST00000604650 476 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC064872.1-201ENST00000604823 1072 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC092354.1-201ENST00000606057 376 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC004832.5-201ENST00000608677 401 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC093838.1-201ENST00000613014 469 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 AC010680.1-201ENST00000590024 3590 ntBASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
PDLIM5Q96HC4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 SNORA7.4-201ENST00000384249 137 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 SNORD116-4-201ENST00000384733 96 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AL357075.1-201ENST00000404107 726 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MIR1289-1-201ENST00000408836 144 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MED14P1-201ENST00000430517 648 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AL365184.2-201ENST00000431139 435 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 Z82210.1-201ENST00000440037 231 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 BMI1P1-201ENST00000445879 941 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 PRDX3P3-201ENST00000447765 522 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC091153.1-201ENST00000466297 402 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 CDC42P4-201ENST00000510507 563 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AL133271.1-201ENST00000538229 291 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 TRAV28-201ENST00000557548 323 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MIR4444-1-201ENST00000581696 74 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC060771.1-201ENST00000582031 164 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AP001004.1-201ENST00000582468 324 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MIR4444-2-201ENST00000584390 74 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AF038458.1-201ENST00000588406 262 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 RN7SKP299-201ENST00000606679 301 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 AC010133.1-201ENST00000615809 842 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 MTND4P16-201ENST00000466108 1367 ntBASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PDLIM5Q96HC4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms