Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 RNU6-1097P-201ENST00000363586 107 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 RNU6-1103P-201ENST00000384150 107 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 RNU6-39P-201ENST00000384344 107 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 RPL21P17-201ENST00000397467 475 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 RNA5SP129-201ENST00000410276 118 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 ISCA1P1-201ENST00000426679 387 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL049874.1-201ENST00000489560 388 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC090572.1-201ENST00000519251 160 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 HMGB1P41-201ENST00000520234 440 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL355836.1-201ENST00000555951 870 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 MIR3921-201ENST00000577308 85 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AP003465.2-201ENST00000602571 373 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.6-201ENST00000603753 252 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.11-201ENST00000604059 253 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AC008162.1-201ENST00000604718 254 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.1-201ENST00000604752 252 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL049634.3-201ENST00000604968 457 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 Z84480.1-201ENST00000605131 311 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.5-201ENST00000605253 252 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.12-201ENST00000605291 253 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.8-201ENST00000605353 252 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 AL670379.7-201ENST00000605823 252 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 PWAR6-201ENST00000552334 4618 ntBASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHMP4CQ96CF2 RNA5SP51-201ENST00000364750 119 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 RNU6-108P-201ENST00000365558 107 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 SNORA36C-201ENST00000384289 132 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 MTCO3P40-201ENST00000392516 676 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 PTMAP5-201ENST00000393073 333 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 OR2AS1P-201ENST00000427827 319 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AL358232.1-201ENST00000448030 501 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC022364.2-201ENST00000457963 554 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC091153.1-201ENST00000466297 402 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 RPS3AP14-201ENST00000483907 780 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 UBE2CP3-201ENST00000502715 450 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AP003072.2-201ENST00000527756 676 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC124947.2-202ENST00000552735 133 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 MIR4444-1-201ENST00000581696 74 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 MIR4444-2-201ENST00000584390 74 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC007687.1-201ENST00000602704 304 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 U4.5-201ENST00000617137 123 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 AC009161.2-201ENST00000624626 138 ntBASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4CQ96CF2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 RNU6-641P-201ENST00000384006 107 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 MIR558-201ENST00000384920 94 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 MIR1290-201ENST00000408735 78 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC018630.2-202ENST00000422992 927 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 RAC1P6-201ENST00000423911 575 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 YME1L1P1-201ENST00000429435 297 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC093392.2-201ENST00000450682 337 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AL133162.1-201ENST00000463228 453 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 RN7SL432P-201ENST00000484057 298 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 HMGN1P11-201ENST00000508668 303 ntBASIC4.39□□□□□ -1.71
CHMP4CQ96CF2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms