Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 Z98949.2-201ENST00000440996 144 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 snoU13.3-201ENST00000459441 104 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 RPS27AP13-201ENST00000498403 237 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 MRPS35P2-201ENST00000508242 191 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 SNORA31.3-201ENST00000516029 96 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 RNU4-77P-201ENST00000516692 156 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 RPL23AP53-201ENST00000521854 457 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC126177.3-201ENST00000551839 688 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 SNORD58B-201ENST00000607313 66 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC073136.1-201ENST00000449426 2884 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AL590240.1-201ENST00000334118 313 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RNU6-1249P-201ENST00000363237 111 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AL590704.1-201ENST00000402856 794 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RNU2-43P-201ENST00000410306 190 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RNU6-55P-201ENST00000411092 107 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RPL17P36-201ENST00000420302 549 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 EIF4EP1-201ENST00000422311 642 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC097713.2-201ENST00000430199 356 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AL591212.2-201ENST00000433923 257 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC008264.1-201ENST00000447612 367 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RPL23AP56-201ENST00000460778 453 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RNU6-264P-201ENST00000517134 104 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 RN7SKP258-201ENST00000517151 304 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 ERHP1-201ENST00000523006 310 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC012339.2-201ENST00000523996 453 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC008489.1-201ENST00000524271 483 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 ELOCP5-201ENST00000604924 333 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 U73479.1-201ENST00000618062 168 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 AC139713.2-214ENST00000642059 1811 ntBASIC5.51□□□□□ -1.53
VTI1AQ96AJ9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 RNU6-371P-201ENST00000364283 108 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC068538.1-201ENST00000376856 336 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 RNU6-1279P-201ENST00000383917 103 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 Y_RNA.512-201ENST00000384518 102 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 U3.22-201ENST00000391120 215 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 U3.32-201ENST00000408116 212 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 RN7SKP16-201ENST00000410180 299 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 BX510359.2-201ENST00000417920 305 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 FTH1P25-201ENST00000447665 469 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 SNORD108-201ENST00000459332 71 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 RPL21P41-201ENST00000459863 264 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC092451.1-201ENST00000480211 153 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 RN7SL652P-201ENST00000577769 300 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 MIR15A-201ENST00000607334 83 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 SDR42E1P2-201ENST00000614861 481 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms