Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-CQ95604 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 AC068538.1-201ENST00000376856 336 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 Y_RNA.398-201ENST00000383952 99 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 RNU6-17P-201ENST00000384245 107 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 RNU6-18P-201ENST00000384527 107 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 SNORA46.1-201ENST00000391069 153 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-CQ95604 U3.39-201ENST00000408569 239 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 RN7SKP51-201ENST00000410781 304 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 RPL23AP36-201ENST00000413895 458 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.68□□□□□ -1.5
HLA-CQ95604 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-CQ95604 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-CQ95604 AC140479.3-201ENST00000418944 1126 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 Z82188.1-201ENST00000436709 154 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AC016700.2-201ENST00000446011 156 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AC073264.2-201ENST00000448886 166 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AL160314.1-201ENST00000490836 438 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 MIR4737-201ENST00000583979 81 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.68□□□□□ -1.5
HLA-CQ95604 RMST_6.1-201ENST00000611980 203 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 MIR6780A-201ENST00000615089 68 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 AC011476.5-201ENST00000615594 130 ntBASIC5.68□□□□□ -1.5
HLA-CQ95604 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.68□□□□□ -1.5
HLA-CQ95604 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
HLA-CQ95604 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HLA-CQ95604 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HLA-CQ95604 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC073136.1-201ENST00000449426 2884 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-CQ95604 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-CQ95604 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC079741.1-201ENST00000321498 212 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 RNU6-959P-201ENST00000384671 107 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 RNU6-21P-201ENST00000384710 107 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 MIR10A-201ENST00000385043 110 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 Y_RNA.580-201ENST00000391004 95 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 RNU6-1135P-201ENST00000411083 103 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC124916.1-201ENST00000444020 547 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 GAPDHP25-201ENST00000447061 1001 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC097484.1-201ENST00000471148 389 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 RPS20P22-201ENST00000473700 357 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC012123.2-201ENST00000485809 248 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 H3F3AP1-201ENST00000559984 334 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.67□□□□□ -1.5
HLA-CQ95604 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 AC073349.3-201ENST00000617616 186 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 MIR7703-201ENST00000620784 77 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 AC008785.1-201ENST00000624475 456 ntBASIC5.67□□□□□ -1.5
HLA-CQ95604 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HLA-CQ95604 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.67□□□□□ -1.5
HLA-CQ95604 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HLA-CQ95604 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-CQ95604 DNM1P47-203ENST00000571780 12667 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-CQ95604 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
HLA-CQ95604 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-CQ95604 RNU6-1290P-201ENST00000362957 109 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 RNU1-139P-201ENST00000391307 165 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 GLULP6-201ENST00000399502 913 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-CQ95604 GEMIN8P3-201ENST00000445417 720 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 NUTF2P3-201ENST00000448540 384 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 SNORD2.1-201ENST00000458762 69 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 TOMM22P4-201ENST00000511318 336 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 AC021006.3-201ENST00000530771 192 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-CQ95604 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 U4.7-201ENST00000638126 106 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-CQ95604 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-CQ95604 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HLA-CQ95604 AC233981.2-201ENST00000611524 1614 ntBASIC5.66□□□□□ -1.5
HLA-CQ95604 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HLA-CQ95604 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms