Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 EXOC5P1-201ENST00000510543 1969 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 MAPK10-373ENST00000641983 6772 ntBASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG4AQ8WYN0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 MIR372-201ENST00000362225 67 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 RNU6-960P-201ENST00000364056 120 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 RNU6-283P-201ENST00000364788 107 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 U1.1-201ENST00000384101 164 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 MT-TD-201ENST00000387419 68 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 RPS26P8-201ENST00000393490 348 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AL391417.1-201ENST00000404100 426 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 RNU2-43P-201ENST00000410306 190 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 SSXP9-201ENST00000417503 292 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 SRIP2-201ENST00000428470 166 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AL121871.1-201ENST00000443413 436 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 ELOCP23-201ENST00000452014 332 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AC106872.2-201ENST00000494303 480 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 SCARNA14-201ENST00000516903 136 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 OR5AL2P-201ENST00000532185 920 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AC125611.2-201ENST00000551907 647 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AC007424.1-203ENST00000554613 687 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 HMGN2P28-201ENST00000606102 262 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AL450472.3-201ENST00000615578 367 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 MIR6830-201ENST00000636015 70 ntBASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.88□□□□□ -1.79
ATG4AQ8WYN0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AL139276.1-201ENST00000311910 1001 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RNU6-179P-201ENST00000363350 107 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RNU6-188P-201ENST00000364207 107 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RNU6-767P-201ENST00000384132 107 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 SNORD37.1-201ENST00000390968 65 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AL359634.1-202ENST00000404721 284 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RNU6-193P-201ENST00000410977 107 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC004866.2-201ENST00000438285 481 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC093019.1-201ENST00000443135 252 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AL162151.2-201ENST00000448875 158 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RN7SL432P-201ENST00000484057 298 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RNU4-29P-201ENST00000515943 174 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RNA5SP503-201ENST00000517047 117 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AP005435.4-201ENST00000529514 284 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC008011.1-201ENST00000545989 227 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC020910.2-201ENST00000603635 610 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AP001486.3-201ENST00000615334 372 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 AC100810.6-201ENST00000638068 285 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 ASNSP3-201ENST00000451989 1306 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 GABPAP-201ENST00000419271 1356 ntBASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ATG4AQ8WYN0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 RNU6-845P-201ENST00000362578 103 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 RNU6-552P-201ENST00000362869 119 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 RNU6-1029P-201ENST00000384109 107 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 SNORA70C-201ENST00000384538 135 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AL162578.1-201ENST00000406202 378 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 AC090774.1-201ENST00000435925 246 ntBASIC3.86□□□□□ -1.79
ATG4AQ8WYN0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms