Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR5G4P-201ENST00000525251 760 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC007458.1-201ENST00000542812 373 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 MIR3921-201ENST00000577308 85 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC017083.3-201ENST00000609955 700 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 EXOC5P1-201ENST00000510543 1969 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.72□□□□□ -1.81
HMGB4Q8WW32 AC008725.1-201ENST00000605123 2263 ntBASIC3.72□□□□□ -1.81
HMGB4Q8WW32 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
HMGB4Q8WW32 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 OR4G2P-201ENST00000328113 903 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RNU6-960P-201ENST00000364056 120 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RNU6-74P-201ENST00000384235 107 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 Y_RNA.554-201ENST00000384672 102 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RNA5SP424-201ENST00000390988 115 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 HSPE1P26-201ENST00000405341 275 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RNU2-37P-201ENST00000410695 177 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 MTATP6P18-201ENST00000417994 673 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 MTCO3P30-201ENST00000426425 670 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 ISCA1P1-201ENST00000426679 387 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 DPPA2P1-201ENST00000428060 556 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 HMGB3P12-201ENST00000438745 556 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RPS15AP9-201ENST00000439856 381 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC020550.1-201ENST00000447385 163 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 HMGB3P22-202ENST00000451823 572 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RPL21P10-201ENST00000463521 490 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RN7SL432P-201ENST00000484057 298 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RPL32P34-201ENST00000486380 400 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC079382.1-201ENST00000493346 557 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RPL31P61-201ENST00000496160 376 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC019235.1-201ENST00000503847 207 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AL359273.1-201ENST00000510918 627 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 FTH1P9-201ENST00000513251 355 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 SNORA70.16-201ENST00000516390 95 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 RNA5SP468-201ENST00000516782 93 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AL355836.1-201ENST00000555951 870 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 MIR4727-201ENST00000622232 55 ntBASIC3.71□□□□□ -1.82
HMGB4Q8WW32 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGB4Q8WW32 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC073343.1-201ENST00000328239 651 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 RNA5SP267-201ENST00000364893 126 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 MIR1-2-201ENST00000384961 85 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 MIR514A1-201ENST00000385133 98 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 NDUFS5P1-201ENST00000405668 289 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 MIR548F1-201ENST00000408667 84 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL158156.1-201ENST00000422509 473 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 RAC1P6-201ENST00000423911 575 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC097713.2-201ENST00000430199 356 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 RPS20P5-201ENST00000434808 360 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC084198.1-201ENST00000477747 402 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL049874.1-201ENST00000489560 388 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 ARL4AP2-201ENST00000507378 601 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC105914.1-201ENST00000511798 226 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 NRON-201ENST00000517270 370 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC103843.2-201ENST00000530523 682 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AP003034.1-201ENST00000534621 422 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC008011.1-201ENST00000545989 227 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AL359212.1-201ENST00000556608 614 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB4Q8WW32 RPL23AP84-201ENST00000571193 464 ntBASIC3.7□□□□□ -1.82
HMGB4Q8WW32 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms