Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM41Q8WV44 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC8.15□□□□□ -1.11
TRIM41Q8WV44 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
TRIM41Q8WV44 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 SMG1P6-201ENST00000532337 2930 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 RNU6-338P-201ENST00000383888 105 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 RNU6-746P-201ENST00000384112 109 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 RNU6-187P-201ENST00000384139 106 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 HIST1H2APS3-201ENST00000403259 134 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 RPL21P24-201ENST00000413752 448 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 UBE2FP1-201ENST00000416536 447 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL606753.1-201ENST00000427435 87 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 RNA5SP230-201ENST00000517039 122 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AC005868.1-201ENST00000536421 331 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AC092470.1-201ENST00000546187 132 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AC090517.1-201ENST00000569307 266 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 MIR5699-201ENST00000578903 90 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 IPO5P1-202ENST00000600039 287 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL670379.6-201ENST00000603753 252 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL670379.1-201ENST00000604752 252 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL670379.5-201ENST00000605253 252 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL670379.8-201ENST00000605353 252 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AL670379.7-201ENST00000605823 252 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 AC130454.1-201ENST00000622948 401 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 CR392039.5-201ENST00000623201 510 ntBASIC8.14□□□□□ -1.11
TRIM41Q8WV44 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
TRIM41Q8WV44 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 TLK1P1-201ENST00000456760 2440 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC138393.1-203ENST00000327086 343 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 Y_RNA.29-201ENST00000362570 113 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 RNVU1-3-201ENST00000364313 161 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 SMIM11P1-201ENST00000369586 178 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 MIR548I2-201ENST00000408348 149 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 RNU6ATAC-201ENST00000408749 126 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 BX276092.3-201ENST00000424182 230 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 PPIAP3-201ENST00000450588 505 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AL139109.1-201ENST00000455491 297 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 snoU13.7-201ENST00000459220 104 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 SCARNA10-201ENST00000459255 330 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC105137.1-201ENST00000484355 562 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC018437.1-201ENST00000492214 406 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC092436.3-201ENST00000511788 257 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 DEFB108D-201ENST00000527787 222 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC022080.3-201ENST00000544433 482 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC093249.4-201ENST00000564755 259 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 SNORA74C-1-201ENST00000580726 201 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.13□□□□□ -1.11
TRIM41Q8WV44 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC8.13□□□□□ -1.11
TRIM41Q8WV44 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 Y_RNA.48-201ENST00000362710 103 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 RNU6-280P-201ENST00000364145 104 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 RNA5SP187-201ENST00000384400 119 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AL022722.2-201ENST00000402519 180 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 UBE2Q2P12-201ENST00000414573 204 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AC093852.1-201ENST00000503587 266 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AC091868.1-201ENST00000508746 304 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 Y_RNA.700-201ENST00000516806 100 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 Y_RNA.719-201ENST00000517156 106 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 RNU6-709P-201ENST00000517257 104 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 HMGN1P28-201ENST00000521340 364 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 AP005435.3-201ENST00000531260 3198 ntBASIC8.12□□□□□ -1.11
TRIM41Q8WV44 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC8.12□□□□□ -1.11
TRIM41Q8WV44 Y_RNA.577-201ENST00000384794 101 ntBASIC8.11□□□□□ -1.11
TRIM41Q8WV44 AC110754.1-201ENST00000399740 601 ntBASIC8.11□□□□□ -1.11
TRIM41Q8WV44 MORN2-203ENST00000409131 544 ntTSL 5 BASIC8.11□□□□□ -1.11
TRIM41Q8WV44 RPL35AP21-201ENST00000437667 333 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms