Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL079305.1-201ENST00000623159 3008 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC000403.1-201ENST00000613696 3585 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 RNY4P24-201ENST00000362735 96 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 SNORD15B-201ENST00000384714 146 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 FCF1P10-201ENST00000407590 479 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 RN7SKP220-201ENST00000410611 288 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL663109.1-201ENST00000411498 844 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 RPL30P2-201ENST00000414021 291 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 SPA17P1-201ENST00000416656 452 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 BEND7P1-201ENST00000422058 457 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL353777.1-201ENST00000425552 326 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 DUTP6-201ENST00000425573 462 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL589872.1-201ENST00000426602 288 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 UBE2V1P13-201ENST00000436983 439 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 SETP5-201ENST00000437270 562 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 CST9LP2-201ENST00000437612 320 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC244505.5-201ENST00000443639 207 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 MTND1P27-201ENST00000451117 902 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL033528.1-201ENST00000453780 140 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 HMGN2P16-201ENST00000456802 261 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 MTND1P3-201ENST00000484956 952 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC004062.1-201ENST00000509926 645 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 MTCO2P32-201ENST00000514865 403 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 RNU6-201P-201ENST00000517100 61 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 BX664608.1-201ENST00000610519 487 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC008498.1-201ENST00000613012 531 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC099842.1-201ENST00000619919 596 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC091953.2-201ENST00000623979 160 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AC010149.2-201ENST00000637608 315 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 AF127577.6-201ENST00000623352 2191 ntBASIC2.47□□□□□ -2.01
LINC01006Q8NI28 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC01006Q8NI28 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
LINC01006Q8NI28 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
LINC01006Q8NI28 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.46□□□□□ -2.01
LINC01006Q8NI28 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
LINC01006Q8NI28 AC066616.2-201ENST00000559334 1481 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 U8.3-201ENST00000363321 132 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RNY4P16-201ENST00000364768 94 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RNY4P34-201ENST00000364779 95 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RNU6-882P-201ENST00000391025 103 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC233728.2-201ENST00000425348 757 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC022018.1-201ENST00000430685 241 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC234775.1-201ENST00000454247 670 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 SNRPFP4-201ENST00000456366 242 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 SNORA18.6-201ENST00000516792 115 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RN7SKP272-201ENST00000516988 232 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 RNU2-46P-201ENST00000517038 113 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC005951.1-201ENST00000576706 485 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 MIR3118-1-201ENST00000581787 76 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC078795.2-201ENST00000602835 1252 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC068790.3-201ENST00000602988 553 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AL022099.1-201ENST00000604551 712 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AL451064.1-201ENST00000607718 471 ntBASIC2.46□□□□□ -2.02
LINC01006Q8NI28 AC104073.3-201ENST00000610942 955 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms