Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNU6-799P-201ENST00000363567 107 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MTCO1P57-201ENST00000432182 261 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC092473.1-201ENST00000441098 221 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC010285.1-201ENST00000470580 392 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC004852.3-201ENST00000614131 326 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 MIR607-201ENST00000385241 96 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 TAS2R15P-201ENST00000390674 928 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 UBE2V1P11-201ENST00000411559 285 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 KATNBL1P3-201ENST00000443475 909 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 Z77249.1-201ENST00000444622 1175 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 RPS29P20-201ENST00000489592 171 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 SNORA25.15-201ENST00000516487 89 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 FAM92A1P1-201ENST00000528023 890 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 MIR4504-201ENST00000577413 92 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 AC103810.1-201ENST00000579873 453 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 AC108479.2-201ENST00000617314 601 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.53□□□□□ -2.33
SYNE1Q8NF91 CR848007.1-201ENST00000442354 1699 ntBASIC0.53□□□□□ -2.33
SYNE1Q8NF91 RNU6-386P-201ENST00000362650 107 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNU6-516P-201ENST00000411381 104 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 EZH2P1-201ENST00000431167 291 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC002542.1-201ENST00000440683 193 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 UBBP3-201ENST00000445497 241 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MTND2P19-201ENST00000449129 1012 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 NOP56P3-201ENST00000549457 385 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC120053.1-201ENST00000607706 736 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC106028.5-201ENST00000610332 395 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL158801.5-201ENST00000623123 465 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNA5SP354-201ENST00000391247 136 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL033519.2-201ENST00000403958 392 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 snoU13.3-201ENST00000459441 104 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MTCO3P42-201ENST00000509488 518 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MTCO3P39-201ENST00000514812 518 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RN7SL274P-201ENST00000492268 272 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNA5SP476-201ENST00000516613 103 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 GLYCAM1-201ENST00000546596 285 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC016727.2-201ENST00000603988 621 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC103810.8-201ENST00000607347 118 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MTCYBP17-201ENST00000503579 789 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC009127.3-201ENST00000570531 403 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MIR4419B-201ENST00000577260 68 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNA5SP391-201ENST00000363456 119 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNU1-42P-201ENST00000364033 160 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 MIR193B-201ENST00000384907 83 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC068135.1-201ENST00000446164 246 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 C1DP3-201ENST00000455013 423 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 snoU13.4-201ENST00000458916 104 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 FABP5P5-201ENST00000515537 406 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 RNU5A-7P-201ENST00000515979 116 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.52□□□□□ -2.33
SYNE1Q8NF91 OR5AQ1P-201ENST00000527596 927 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AP002748.2-201ENST00000528671 348 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 AC092474.3-201ENST00000603022 568 ntBASIC0.52□□□□□ -2.33
SYNE1Q8NF91 KATNBL1P1-201ENST00000605192 748 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms