Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 MIR16-1-201ENST00000385271 89 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 SNORD65C-201ENST00000390962 71 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AP002784.2-201ENST00000397300 549 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AL121978.1-201ENST00000402778 359 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AL445183.3-201ENST00000414168 502 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 HMGN2P19-201ENST00000425149 265 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC098614.2-201ENST00000426040 255 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 RPL23AP16-201ENST00000441715 421 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 MTCO3P2-201ENST00000457365 171 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 RNU7-23P-201ENST00000459465 62 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC093767.1-201ENST00000504523 156 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 COL6A4P2-205ENST00000509855 506 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 SNORA48.9-201ENST00000516419 162 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC068313.1-201ENST00000604028 1008 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC002487.1-201ENST00000604565 994 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC005332.10-201ENST00000612725 619 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC073308.1-201ENST00000623696 305 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AC132825.7-201ENST00000638744 335 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 SNORD114-1-201ENST00000362705 72 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AL024474.1-201ENST00000404655 591 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AL133384.1-201ENST00000412744 351 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 UBE2FP3-201ENST00000436366 524 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 RNU6-420P-201ENST00000458780 107 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 snoU13.23-201ENST00000458863 104 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 KLRA1P-201ENST00000503499 986 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AC109464.2-201ENST00000510242 943 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 OR5AK1P-201ENST00000524837 922 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 VN1R9P-201ENST00000614184 867 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AC026634.1-201ENST00000634369 198 ntBASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CCDC112Q8NEF3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC027124.2-201ENST00000428249 105 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC024082.2-201ENST00000434771 238 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC097493.1-201ENST00000463958 372 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC025181.1-201ENST00000477507 416 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 RPL21P47-201ENST00000483696 477 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 SNORA31.18-201ENST00000517043 134 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 NIFKP8-201ENST00000560500 874 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 NRBF2P1-201ENST00000587407 859 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 KATNBL1P5-201ENST00000605015 517 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC106730.3-201ENST00000624568 641 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 OR5H6-203ENST00000642105 978 ntBASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC112Q8NEF3 RNU6-251P-201ENST00000363235 104 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 SNORA51.6-201ENST00000384151 125 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC099548.1-201ENST00000421443 426 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC005345.1-201ENST00000431868 217 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 MTCYBP45-201ENST00000435243 565 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 Z82190.1-201ENST00000454534 490 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 RPL23AP42-201ENST00000471152 471 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 RPL21P99-201ENST00000480369 423 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC108210.2-201ENST00000503681 201 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AL359273.1-201ENST00000510918 627 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC109471.1-201ENST00000511631 612 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 MIR3122-201ENST00000577243 73 ntBASIC2.15□□□□□ -2.07
CCDC112Q8NEF3 MIR4769-201ENST00000584126 77 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms