Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU6-474P-201ENST00000384243 107 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 MIR559-201ENST00000385188 96 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.579-201ENST00000390939 94 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RPL7P60-201ENST00000397636 735 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 HSPE1P26-201ENST00000405341 275 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 MTCYBP8-201ENST00000422855 651 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RPL23AP24-201ENST00000458203 385 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RPS4XP13-201ENST00000483219 789 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RPL23AP41-201ENST00000484754 458 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-410P-201ENST00000517006 107 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AP000907.2-201ENST00000530827 353 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 ELOCP31-201ENST00000540463 467 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC026464.5-201ENST00000562497 722 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 MIR4644-201ENST00000579929 84 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 MIR3690-201ENST00000580266 75 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AL022099.1-201ENST00000604551 712 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC040896.1-201ENST00000613819 479 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AL445363.3-201ENST00000623080 671 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AL159972.1-201ENST00000625150 448 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 TAB3P1-202ENST00000452645 1634 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP322-201ENST00000363617 119 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP509-201ENST00000364577 119 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.259-201ENST00000364619 101 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 SNORA4.3-201ENST00000365564 137 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 SNORD42.2-201ENST00000365570 69 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL359837.1-201ENST00000381357 287 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-43P-201ENST00000384302 107 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 SNORA70C-201ENST00000384538 135 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-1160P-201ENST00000384546 104 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-606P-201ENST00000384721 111 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-882P-201ENST00000391025 103 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.615-201ENST00000410769 117 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RPS29P17-201ENST00000430795 166 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 DDX3P2-201ENST00000446138 111 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 PHBP16-201ENST00000446318 950 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 MTND3P16-201ENST00000452205 344 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC079804.1-201ENST00000461922 436 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 RN7SL98P-201ENST00000462271 300 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC006512.1-201ENST00000468816 291 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC011276.1-201ENST00000469688 323 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC110792.1-201ENST00000491826 472 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 SNRPGP16-201ENST00000533275 226 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 BNIP3P6-201ENST00000549284 499 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 MIR3146-201ENST00000580367 79 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 MIR3939-201ENST00000582614 106 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AP001029.3-201ENST00000588063 596 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC113403.1-201ENST00000604910 193 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC103710.3-201ENST00000608157 948 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL355810.1-201ENST00000614629 552 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 uc_338.32-201ENST00000615087 172 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC010205.1-201ENST00000616668 449 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AL138721.1-201ENST00000616756 179 ntBASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIMC1Q8NDZ2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL672296.1-201ENST00000427780 2158 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 ASNSP3-201ENST00000451989 1306 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms