Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS27AP8-201ENST00000452665 445 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RPS20P20-201ENST00000460498 340 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RPL27AP5-201ENST00000469428 449 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC117440.1-201ENST00000474107 571 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RAC1P5-201ENST00000512182 576 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RNU6-678P-201ENST00000516832 109 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RN7SKP272-201ENST00000516988 232 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RNA5SP291-201ENST00000517222 105 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC245166.1-201ENST00000521012 253 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AP002748.2-201ENST00000528671 348 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AP002404.1-201ENST00000532005 451 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 SETP2-201ENST00000553886 926 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 OR4H12P-201ENST00000556269 907 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AMZ2P1-203ENST00000565833 850 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC136618.2-201ENST00000575091 400 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 MIR4325-201ENST00000583049 90 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 DUXAP4-201ENST00000603046 613 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 U73023.1-201ENST00000603134 700 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC004852.3-201ENST00000614131 326 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC013476.2-201ENST00000614456 459 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC009090.3-201ENST00000616553 565 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL031667.3-201ENST00000620124 655 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC091965.5-201ENST00000624785 342 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC019226.1-201ENST00000625666 515 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL049641.1-201ENST00000441055 1948 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC007785.2-201ENST00000598627 1916 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 RNU6-433P-201ENST00000363216 104 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 SNORA9-201ENST00000384215 133 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 MIR1302-8-201ENST00000408342 128 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 RPL23AP39-201ENST00000415533 405 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 Z85995.1-201ENST00000415547 335 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 OR2A20P-203ENST00000498397 1268 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC104685.1-201ENST00000502445 371 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 ARL4AP2-201ENST00000507378 601 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL3Q8N8U3 MIR3915-201ENST00000578518 97 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AL161756.2-201ENST00000604597 246 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 AC099063.3-201ENST00000642066 185 ntBASIC3.09□□□□□ -1.91
RTL3Q8N8U3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
RTL3Q8N8U3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RTL3Q8N8U3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.92
RTL3Q8N8U3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.92
RTL3Q8N8U3 AL138713.1-201ENST00000624026 2130 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC099654.7-201ENST00000635788 2127 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 RNU6-853P-201ENST00000364306 107 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 RNU6-432P-201ENST00000384196 109 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 MIR491-201ENST00000384877 84 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AL138885.1-201ENST00000405921 675 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 MIR1289-1-201ENST00000408836 144 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AL645937.1-202ENST00000421799 937 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 SAR1AP4-201ENST00000429225 591 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 MTND1P20-201ENST00000430341 950 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 MTND4P32-201ENST00000437189 1237 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 RPS26P21-201ENST00000475397 348 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC034222.1-201ENST00000494052 532 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC026427.2-201ENST00000506228 536 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.08□□□□□ -1.92
RTL3Q8N8U3 AC034159.1-201ENST00000513885 583 ntBASIC3.08□□□□□ -1.92
RTL3Q8N8U3 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms