Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC83Q8IWF9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC83Q8IWF9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCDC83Q8IWF9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC83Q8IWF9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC83Q8IWF9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 RPL21P132-201ENST00000331267 462 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 MIR1305-201ENST00000408300 86 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC018630.2-202ENST00000422992 927 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC109583.1-201ENST00000432156 268 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 LSM1P1-201ENST00000438629 273 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 CACYBPP2-201ENST00000453625 678 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC106872.3-201ENST00000495104 446 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC022447.3-201ENST00000506865 495 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC117522.3-201ENST00000507974 584 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 RNU6-798P-201ENST00000516912 103 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AP000889.1-201ENST00000530968 660 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 MTND1P24-201ENST00000552175 861 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC009097.3-201ENST00000563557 1018 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC234772.3-201ENST00000602277 528 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC008277.2-201ENST00000605196 797 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AC013244.3-201ENST00000605614 388 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 AL603758.1-201ENST00000618654 241 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.16□□□□□ -1.9
CCDC83Q8IWF9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC83Q8IWF9 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.9
CCDC83Q8IWF9 RNU6-433P-201ENST00000363216 104 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 RNA5SP88-201ENST00000365560 109 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 MIR514A1-201ENST00000385133 98 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 RNU6-516P-201ENST00000411381 104 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL022400.1-201ENST00000423946 935 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL590383.1-201ENST00000428602 75 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 TAAR7P-201ENST00000436141 242 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 RPL23AP58-201ENST00000440453 469 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 HMGN1P28-201ENST00000521340 364 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 CASP1P1-201ENST00000526345 212 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AC068587.4-201ENST00000533893 186 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 MIR4635-201ENST00000583759 79 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 UBE2L4-201ENST00000587688 464 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AC022022.2-201ENST00000602989 360 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL627309.6-201ENST00000606857 840 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL158801.5-201ENST00000623123 465 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 AL356596.1-201ENST00000624230 379 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.15□□□□□ -1.91
CCDC83Q8IWF9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RNA5SP210-201ENST00000391034 120 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RPL21P75-201ENST00000396599 483 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RPL21P28-201ENST00000401418 483 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AL590084.2-201ENST00000401481 382 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AL592114.1-201ENST00000403842 483 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 XKRYP1-201ENST00000423438 492 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 XKRYP2-201ENST00000432915 492 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 UBE2FP3-201ENST00000436366 524 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RPL35AP22-201ENST00000436855 335 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC009237.8-201ENST00000445492 379 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RPL21P39-201ENST00000463605 483 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RPL21P93-201ENST00000480465 489 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC233702.1-201ENST00000482905 502 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC087190.1-201ENST00000484462 480 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC093591.1-201ENST00000491435 481 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 RPL21P16-201ENST00000495531 483 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 AC100870.1-201ENST00000522035 505 ntBASIC3.14□□□□□ -1.91
CCDC83Q8IWF9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms