Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC244505.5-201ENST00000443639 207 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 CEACAMP4-201ENST00000457676 421 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 SNORD97-201ENST00000459187 142 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC079140.3-201ENST00000511111 550 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC114797.1-201ENST00000514003 728 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 RN7SKP298-201ENST00000515950 94 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 SNORA18.6-201ENST00000516792 115 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 RNU2-46P-201ENST00000517038 113 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AP002963.1-201ENST00000530590 184 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AP003122.4-201ENST00000530980 758 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC128657.1-201ENST00000549459 145 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC005951.1-201ENST00000576706 485 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AL451007.1-201ENST00000595491 289 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 BRDTP1-201ENST00000605735 677 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC108747.1-201ENST00000609508 535 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AL161734.1-201ENST00000609720 557 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 HULC.1-201ENST00000612720 240 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC100793.4-201ENST00000613683 429 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AL133173.2-201ENST00000614270 90 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AL162274.2-201ENST00000614406 332 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC006338.1-201ENST00000618453 749 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC006386.2-201ENST00000624491 75 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC012005.1-201ENST00000624575 75 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 Y_RNA.194-201ENST00000363985 102 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 U3.11-201ENST00000364476 212 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 COTL1P1-201ENST00000422309 375 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 Z75741.1-201ENST00000446793 314 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC016696.1-201ENST00000446949 318 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AL049874.1-201ENST00000489560 388 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 Y_RNA.655-201ENST00000515919 96 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AL391813.2-201ENST00000609113 322 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AC091304.9-201ENST00000612091 226 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 AL110115.1-201ENST00000614396 364 ntBASIC3.78□□□□□ -1.8
HERC6Q8IVU3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
HERC6Q8IVU3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 RNA5SP295-201ENST00000362655 121 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 MIR514A1-201ENST00000385133 98 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AL591034.1-201ENST00000407447 340 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 C1DP2-201ENST00000418167 426 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 ELOCP4-201ENST00000420090 333 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 RPL21P109-201ENST00000422213 475 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 USP9YP36-201ENST00000424581 829 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 GAPDHP17-201ENST00000449858 1001 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 RPL27AP5-201ENST00000469428 449 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC010631.1-201ENST00000474150 156 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC011825.1-201ENST00000484967 388 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 Vault.3-201ENST00000516676 95 ntBASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.77□□□□□ -1.81
HERC6Q8IVU3 AC006504.3-201ENST00000586818 523 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms