Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC009902.3-201ENST00000606235 2172 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-259P-201ENST00000383999 107 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AL136116.1-201ENST00000403591 381 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 RNA5SP184-201ENST00000411071 108 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 RPL23AP82-202ENST00000427528 469 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 ARPC3P1-201ENST00000437218 533 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC105272.1-201ENST00000438604 198 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AF228730.2-201ENST00000438784 848 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 GAPDHP17-201ENST00000449858 1001 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC234775.1-201ENST00000454247 670 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 CENPBD1P1-201ENST00000464061 469 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC017037.2-201ENST00000513850 890 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 Y_RNA.672-201ENST00000516289 104 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AP003181.2-201ENST00000528941 181 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC126177.3-201ENST00000551839 688 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC009063.1-201ENST00000563342 702 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC112204.3-201ENST00000623822 332 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 IGHVIII-44-202ENST00000636235 289 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
KRT28Q7Z3Y7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AC062016.1-201ENST00000355719 319 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RNU6-1078P-201ENST00000364522 103 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 Y_RNA.548-201ENST00000384656 105 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 MIR1183-201ENST00000408856 89 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RNU6-712P-201ENST00000410558 100 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RNU2-8P-201ENST00000410727 190 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 BX295541.1-201ENST00000417774 250 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RPS3AP44-201ENST00000425466 790 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 ISCA1P6-201ENST00000427740 390 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RPS4XP13-201ENST00000483219 789 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RN7SKP272-201ENST00000516988 232 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AP003122.4-201ENST00000530980 758 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AL356432.3-201ENST00000568952 465 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 ATP1B3P1-201ENST00000605365 821 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 AL021997.1-201ENST00000605757 193 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 TUG1_1.1-201ENST00000610654 145 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 PISRT1-201ENST00000626175 531 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRT28Q7Z3Y7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 Y_RNA.582-201ENST00000391023 95 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 AL137014.1-201ENST00000420490 1226 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 NUP35P1-201ENST00000422734 947 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 AC233728.2-201ENST00000425348 757 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 CST9LP2-201ENST00000437612 320 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 AL109933.2-201ENST00000452651 260 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 MTND1P9-201ENST00000453775 944 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 SRRM1P2-201ENST00000464531 1192 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 RNU6-528P-201ENST00000516926 100 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 RNU2-46P-201ENST00000517038 113 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.2□□□□□ -1.74
KRT28Q7Z3Y7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms