Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC078785.3-201ENST00000476607 425 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 PPIAP15-201ENST00000479662 484 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 LRRC34P2-201ENST00000514850 553 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RNU2-58P-201ENST00000516403 183 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC026403.1-201ENST00000518938 295 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 SUB1P1-201ENST00000524415 382 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 DEFB108D-201ENST00000527787 222 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC128657.1-201ENST00000549459 145 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC015917.1-201ENST00000579654 510 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AP001029.3-201ENST00000588063 596 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 SNRPGP15-201ENST00000600149 222 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AL031176.1-201ENST00000604554 466 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC128687.2-201ENST00000609657 566 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC006023.2-201ENST00000609916 167 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC093648.1-201ENST00000623546 606 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC092326.2-201ENST00000624772 1561 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 RIOK3P1-201ENST00000418778 1528 ntBASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
C9orf139Q6ZV77 HSPE1P11-201ENST00000339579 310 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 SNORA71.3-201ENST00000362582 128 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RNU6-996P-201ENST00000365438 107 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RNU6-432P-201ENST00000384196 109 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 U8.11-201ENST00000384699 133 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 U8.12-201ENST00000384701 133 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RNU6-754P-201ENST00000391166 107 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL136116.1-201ENST00000403591 381 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RNU2-36P-201ENST00000410361 191 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RNU2-37P-201ENST00000410695 177 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 MTCYBP8-201ENST00000422855 651 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL513185.2-201ENST00000425543 193 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL591419.1-201ENST00000427423 339 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 MED13P1-201ENST00000428342 171 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC005094.1-201ENST00000440420 368 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 U8.18-201ENST00000459285 133 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 snoU13.22-201ENST00000459428 104 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL133162.1-201ENST00000463228 453 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 RPL21P104-201ENST00000464143 478 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC026427.2-201ENST00000506228 536 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 HMGB1P41-201ENST00000520234 440 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 FAM60DP-201ENST00000524174 632 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 OR5D17P-201ENST00000531492 978 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 OR5BN1P-201ENST00000532955 829 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 MIR3944-201ENST00000581277 108 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 MIR4719-201ENST00000585233 84 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC010525.2-201ENST00000590920 195 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL356055.1-201ENST00000602528 446 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC025946.2-201ENST00000603398 234 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AL139395.1-201ENST00000603662 160 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC093838.1-201ENST00000613014 469 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 uc_338.32-201ENST00000615087 172 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 AC244100.1-202ENST00000621554 382 ntBASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
C9orf139Q6ZV77 USP8P1-201ENST00000494673 3183 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms