Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AC006600.1-201ENST00000572529 153 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 FAM60BP-201ENST00000578364 658 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AC125232.2-201ENST00000592457 143 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 VN1R91P-201ENST00000594377 169 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 IMMP1LP3-201ENST00000604197 224 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AC123912.5-201ENST00000605470 343 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AL121917.1-203ENST00000605534 577 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 AC118658.2-201ENST00000618697 459 ntBASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LRFN4Q6PJG9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 U8.8-201ENST00000365399 135 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 RNU6-472P-201ENST00000384299 107 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 RNU6-1026P-201ENST00000384465 108 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 MIR1182-201ENST00000408363 97 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC009238.2-201ENST00000431026 355 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 RPS3AP12-201ENST00000443616 753 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 PABPC1P6-201ENST00000445594 1829 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 RN7SL515P-201ENST00000463999 297 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC092324.1-201ENST00000468671 324 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 MLLT10P2-201ENST00000506434 249 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 NDUFB4P9-201ENST00000511646 388 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 HMGB3P26-201ENST00000560051 582 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC078899.3-201ENST00000599065 212 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 LINC01109-201ENST00000603837 3081 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AL161798.1-201ENST00000604630 131 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 MTND4LP5-201ENST00000605152 292 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC004805.2-201ENST00000605382 482 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 MIR3976-201ENST00000606807 139 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC022467.1-201ENST00000614738 749 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 MIR6729-201ENST00000618194 65 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 U6.104-201ENST00000637979 90 ntBASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LRFN4Q6PJG9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
LRFN4Q6PJG9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC004925.1-201ENST00000624256 2706 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 DEFB108F-201ENST00000344638 222 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 MIR412-201ENST00000362142 91 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 RN7SKP224-201ENST00000364140 325 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 RNU4-50P-201ENST00000364361 141 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 RNU1-43P-201ENST00000365052 165 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 MIR600-201ENST00000385007 98 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 MIR1286-201ENST00000408112 78 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 MIR1302-6-201ENST00000408466 90 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AL158156.1-201ENST00000422509 473 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 RBMY1KP-201ENST00000423480 476 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC079780.1-201ENST00000428259 207 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC133134.1-201ENST00000466800 359 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 FO393415.2-201ENST00000480085 343 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC084851.1-201ENST00000529105 249 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 OR5D17P-201ENST00000531492 978 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC023157.2-201ENST00000540596 141 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC006023.2-201ENST00000609916 167 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC073869.10-201ENST00000642016 354 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms