Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 MIR7153-201ENST00000637758 57 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 SNORD48-201ENST00000364953 64 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC234781.4-201ENST00000419384 244 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 CENPUP1-201ENST00000526649 1202 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.79□□□□□ -2.28
UBR4Q5T4S7 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AL451049.1-201ENST00000608672 497 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AC090740.1-201ENST00000623193 2262 ntBASIC0.79□□□□□ -2.28
UBR4Q5T4S7 AL357520.1-201ENST00000441557 453 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AC006213.5-201ENST00000619673 288 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.495-201ENST00000384435 112 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 SNORA8.3-201ENST00000384679 139 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 HMGN1P14-201ENST00000412459 517 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 NDUFB4P5-201ENST00000415445 361 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 XKRY2-201ENST00000442362 1093 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AC069528.1-202ENST00000482888 637 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AL627230.6-201ENST00000611129 280 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.52-201ENST00000362760 96 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 CYCSP33-201ENST00000414485 327 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 RPL35AP22-201ENST00000436855 335 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
UBR4Q5T4S7 USP9YP5-201ENST00000511770 630 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 AC095050.2-201ENST00000510748 1458 ntBASIC0.78□□□□□ -2.28
UBR4Q5T4S7 MTCO1P6-201ENST00000481192 1384 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 Y_RNA.146-201ENST00000363549 102 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 RNU6-1164P-201ENST00000364428 107 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 AC244505.4-201ENST00000434905 287 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC0.78□□□□□ -2.29
UBR4Q5T4S7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC0.78□□□□□ -2.29
UBR4Q5T4S7 SSXP5-201ENST00000443473 287 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 ASNSP4-201ENST00000511103 447 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC0.78□□□□□ -2.29
UBR4Q5T4S7 Y_RNA.659-201ENST00000515994 113 ntBASIC0.78□□□□□ -2.29
UBR4Q5T4S7 AC018630.2-201ENST00000534866 2403 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 Y_RNA.86-201ENST00000363020 111 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC093788.1-201ENST00000609356 927 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC034102.8-201ENST00000615146 484 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC092159.4-201ENST00000624944 550 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 RNU4-32P-201ENST00000363404 141 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 MTND4P13-201ENST00000402078 1023 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 MTCO3P31-201ENST00000405526 789 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC241520.1-201ENST00000422654 1099 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 RPL39P40-201ENST00000445481 146 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC104435.1-201ENST00000483483 166 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC090071.1-201ENST00000507713 644 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 RPL23AP44-201ENST00000482216 473 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
UBR4Q5T4S7 RNU6-567P-201ENST00000516746 107 ntBASIC0.77□□□□□ -2.29
UBR4Q5T4S7 MIR518A2-201ENST00000384966 87 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 MIR320A-201ENST00000385302 82 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AL021397.1-201ENST00000451806 248 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AC024405.2-202ENST00000532731 184 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AC007834.2-201ENST00000536310 343 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AP002967.1-201ENST00000624203 539 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 RNU4-77P-201ENST00000516692 156 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AC007687.1-201ENST00000602704 304 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AC114973.1-201ENST00000429057 632 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 OR4K8P-201ENST00000578842 1048 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.76□□□□□ -2.29
UBR4Q5T4S7 MIR4419B-201ENST00000577260 68 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC0.76□□□□□ -2.29
UBR4Q5T4S7 RNA5SP98-201ENST00000363158 137 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AC104806.1-201ENST00000508720 308 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 TBCAP3-201ENST00000512475 312 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR4Q5T4S7 MIR378F-201ENST00000578143 78 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AL008729.2-201ENST00000606393 473 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AL512283.1-201ENST00000606756 1384 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms