Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 MTND1P31-201ENST00000449206 961 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 CACYBPP2-201ENST00000453625 678 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 RPL30P5-201ENST00000494923 336 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC017037.2-201ENST00000513850 890 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 RNU1-41P-201ENST00000516161 162 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 RNU1-48P-201ENST00000516400 162 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 RN7SKP265-201ENST00000516448 223 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 OR6C7P-201ENST00000547875 934 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 SETP2-201ENST00000553886 926 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 DUXAP1-201ENST00000556632 463 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC234772.3-201ENST00000602277 528 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 HSPE1P7-201ENST00000604681 321 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL590099.1-201ENST00000615276 138 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL136981.2-201ENST00000617319 734 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL607023.1-201ENST00000620045 248 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC011330.2-201ENST00000621680 635 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC092608.2-201ENST00000624427 218 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 CRYM-AS1-204ENST00000637983 556 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC006927.4-201ENST00000639187 543 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SHROOM1Q2M3G4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC010680.1-201ENST00000590024 3590 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-157P-201ENST00000383957 107 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 MIR518C-201ENST00000384822 101 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 RNA5SP344-201ENST00000411081 104 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AL513477.1-202ENST00000417061 214 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 MTCO2P5-201ENST00000422621 426 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AL591719.1-201ENST00000444669 744 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 HSPE1P23-201ENST00000509838 286 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 SNORA70.16-201ENST00000516390 95 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 MIR4635-201ENST00000583759 79 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC079395.3-201ENST00000615161 484 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC010338.1-201ENST00000621823 717 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC027309.3-201ENST00000623419 351 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AP000526.1-201ENST00000603308 1388 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
SHROOM1Q2M3G4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC108206.1-201ENST00000570186 4159 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 MIR26A1-201ENST00000362205 77 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 SNORD62.1-201ENST00000362541 86 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 SNORD21-201ENST00000383953 95 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 FO393413.1-201ENST00000402892 195 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 MIR1261-201ENST00000408659 82 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 MTCYBP38-201ENST00000417160 1123 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AL356867.1-201ENST00000429623 299 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 RPL7P36-201ENST00000444633 681 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 UBBP3-201ENST00000445497 241 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 RPL30P9-201ENST00000465586 330 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 HSPE1P6-201ENST00000479457 291 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 TRBV12-1-201ENST00000479785 344 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC008549.1-201ENST00000512900 643 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC096725.1-201ENST00000514266 313 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 RPL7P20-201ENST00000520308 745 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms