Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 SNORA70.16-201ENST00000516390 95 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.06□□□□□ -1.92
PTCH1Q13635 NDUFS5P6-201ENST00000529136 295 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC087897.1-201ENST00000550134 156 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 MAGOH2P-202ENST00000584384 429 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC060766.3-201ENST00000591442 263 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 BNIP3P27-201ENST00000599991 412 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC013444.2-201ENST00000603317 787 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AL139022.2-201ENST00000606934 443 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC097504.2-201ENST00000608088 454 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC091046.2-201ENST00000620775 665 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 MIR6132-201ENST00000622083 109 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC010297.1-201ENST00000623948 149 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.06□□□□□ -1.92
PTCH1Q13635 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCH1Q13635 AC005539.1-201ENST00000443768 1479 ntBASIC3.06□□□□□ -1.92
PTCH1Q13635 MIR21-201ENST00000362134 72 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 Y_RNA.355-201ENST00000365462 98 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PTCH1Q13635 SNORD65.1-201ENST00000390889 71 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 SNORA11.4-201ENST00000408823 129 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 LUZP4P1-201ENST00000415420 344 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCH1Q13635 AC092427.1-201ENST00000439177 601 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCH1Q13635 AC124916.1-201ENST00000444020 547 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC104164.3-201ENST00000467363 1258 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC092902.1-201ENST00000486999 259 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCH1Q13635 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.05□□□□□ -1.92
PTCH1Q13635 OR5AK1P-201ENST00000524837 922 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC239860.2-201ENST00000525886 270 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PTCH1Q13635 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.05□□□□□ -1.92
PTCH1Q13635 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCH1Q13635 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCH1Q13635 AC245036.5-201ENST00000596330 847 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCH1Q13635 AC011458.1-201ENST00000604034 617 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC080013.4-201ENST00000607624 649 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 AC004009.2-201ENST00000623016 728 ntBASIC3.05□□□□□ -1.92
PTCH1Q13635 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PTCH1Q13635 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
PTCH1Q13635 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCH1Q13635 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCH1Q13635 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCH1Q13635 RPL7P46-201ENST00000425129 740 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.04□□□□□ -1.92
PTCH1Q13635 RPL39P6-201ENST00000448289 150 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AL031183.1-201ENST00000457667 207 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AC091179.1-201ENST00000461606 579 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AC125611.1-201ENST00000549563 229 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 AC126365.2-201ENST00000580630 379 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCH1Q13635 AC015688.2-201ENST00000584523 262 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 MIR8070-201ENST00000616510 88 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 AL356266.1-201ENST00000623311 483 ntBASIC3.04□□□□□ -1.92
PTCH1Q13635 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.04□□□□□ -1.92
PTCH1Q13635 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTCH1Q13635 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PTCH1Q13635 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.04□□□□□ -1.92
PTCH1Q13635 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCH1Q13635 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.04□□□□□ -1.92
PTCH1Q13635 DEFB108F-201ENST00000344638 222 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 RNU6-1027P-201ENST00000383998 107 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 SNORA67.3-201ENST00000384366 140 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 HMGB1P11-201ENST00000413899 637 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCH1Q13635 MTND2P5-201ENST00000432656 1006 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCH1Q13635 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCH1Q13635 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCH1Q13635 AL359385.1-201ENST00000456509 365 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AC008427.1-201ENST00000503102 655 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 FAM92A1P2-202ENST00000504766 877 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTCH1Q13635 AL359273.1-201ENST00000510918 627 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCH1Q13635 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCH1Q13635 DEFB108D-201ENST00000527787 222 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCH1Q13635 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCH1Q13635 DUXAP10-204ENST00000612052 616 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AC010872.1-201ENST00000624225 675 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AL160394.1-201ENST00000624765 724 ntBASIC3.03□□□□□ -1.92
PTCH1Q13635 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCH1Q13635 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCH1Q13635 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTCH1Q13635 RNU6-216P-201ENST00000363282 104 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 RNU6-799P-201ENST00000363567 107 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 SNORA17.3-201ENST00000391159 129 ntBASIC3.02□□□□□ -1.93
PTCH1Q13635 AL356131.1-201ENST00000405826 414 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms