Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC209154.1-201ENST00000582156 337 ntBASIC5.33□□□□□ -1.56
FOXC1Q12948 AC005176.2-201ENST00000596933 147 ntBASIC5.33□□□□□ -1.56
FOXC1Q12948 U7.2-201ENST00000607576 63 ntBASIC5.33□□□□□ -1.56
FOXC1Q12948 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXC1Q12948 AC083809.1-201ENST00000615051 472 ntBASIC5.33□□□□□ -1.56
FOXC1Q12948 MIR3914-2-201ENST00000637339 95 ntBASIC5.33□□□□□ -1.56
FOXC1Q12948 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
FOXC1Q12948 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXC1Q12948 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXC1Q12948 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXC1Q12948 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXC1Q12948 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXC1Q12948 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXC1Q12948 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.33□□□□□ -1.56
FOXC1Q12948 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXC1Q12948 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
FOXC1Q12948 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXC1Q12948 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
FOXC1Q12948 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FOXC1Q12948 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXC1Q12948 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXC1Q12948 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
FOXC1Q12948 UBE2L2-201ENST00000254302 429 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 Y_RNA.337-201ENST00000365312 102 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 RNU6-460P-201ENST00000391158 108 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 AL590139.1-201ENST00000416267 400 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.32□□□□□ -1.56
FOXC1Q12948 RPS20P10-201ENST00000451209 253 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 Y_RNA.637-201ENST00000459424 114 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 RNA5SP116-201ENST00000516132 98 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 RNA5SP165-201ENST00000517142 115 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 AL110118.1-201ENST00000553543 400 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 LARP7P3-201ENST00000579888 337 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXC1Q12948 NF1P5-201ENST00000588287 448 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 AL355812.1-201ENST00000603215 216 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 MAPK10-365ENST00000641902 3825 ntBASIC5.32□□□□□ -1.56
FOXC1Q12948 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXC1Q12948 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.32□□□□□ -1.56
FOXC1Q12948 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXC1Q12948 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC5.32□□□□□ -1.56
FOXC1Q12948 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXC1Q12948 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 INTS6P1-201ENST00000504674 2530 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXC1Q12948 SNORA17.1-201ENST00000362945 126 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 RNVU1-6-201ENST00000364688 164 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 MIR32-201ENST00000384965 70 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 MIR10B-201ENST00000385011 110 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 MIR153-2-201ENST00000385225 87 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 SNORA12.1-201ENST00000390873 148 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 RNU6-821P-201ENST00000390995 107 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXC1Q12948 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXC1Q12948 IGLV2-34-201ENST00000490007 283 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 AL035690.1-201ENST00000490892 383 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 RPL23AP49-201ENST00000492925 468 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
FOXC1Q12948 RN7SKP164-201ENST00000516138 266 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 RNU6-927P-201ENST00000516199 100 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 SNORA31.22-201ENST00000517204 135 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXC1Q12948 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXC1Q12948 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXC1Q12948 AC007494.1-201ENST00000562293 760 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 AC022968.1-201ENST00000567372 442 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXC1Q12948 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXC1Q12948 AC091905.4-201ENST00000623432 202 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 U4.7-201ENST00000638126 106 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXC1Q12948 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
FOXC1Q12948 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 THAP12P5-201ENST00000405864 2275 ntBASIC5.31□□□□□ -1.56
FOXC1Q12948 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXC1Q12948 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
FOXC1Q12948 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXC1Q12948 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXC1Q12948 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXC1Q12948 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms