Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK3Q00526 CDC42P4-201ENST00000510507 563 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 Y_RNA.672-201ENST00000516289 104 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.22□□□□□ -1.89
CDK3Q00526 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK3Q00526 AC006362.1-201ENST00000567392 174 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 RPL23AP84-201ENST00000571193 464 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 MIR3200-201ENST00000580767 85 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 MIR4293-201ENST00000584305 78 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC040904.1-201ENST00000590850 223 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC131902.3-201ENST00000611767 581 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 RNVU1-4-201ENST00000612985 164 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK3Q00526 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC006338.1-201ENST00000618453 749 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.22□□□□□ -1.89
CDK3Q00526 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CDK3Q00526 AC138915.3-201ENST00000562908 1389 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK3Q00526 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDK3Q00526 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.22□□□□□ -1.89
CDK3Q00526 TEX21P-201ENST00000447107 1476 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 ZNF807-201ENST00000328088 1707 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.22□□□□□ -1.89
CDK3Q00526 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CDK3Q00526 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDK3Q00526 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDK3Q00526 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDK3Q00526 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDK3Q00526 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
CDK3Q00526 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDK3Q00526 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDK3Q00526 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDK3Q00526 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 RNY4P34-201ENST00000364779 95 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 RNU6-297P-201ENST00000384636 107 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 MTCO2P34-201ENST00000421994 607 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC006366.1-201ENST00000422002 759 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AL353678.1-201ENST00000422735 741 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC019097.1-201ENST00000424783 735 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 AL356867.1-201ENST00000429623 299 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 USP12PX-201ENST00000432383 1057 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC010153.1-201ENST00000432862 727 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.21□□□□□ -1.9
CDK3Q00526 AC119618.1-201ENST00000434191 222 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.21□□□□□ -1.9
CDK3Q00526 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.21□□□□□ -1.9
CDK3Q00526 RNU7-170P-201ENST00000459303 61 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 RPL23AP62-201ENST00000463396 453 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.21□□□□□ -1.9
CDK3Q00526 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.21□□□□□ -1.9
CDK3Q00526 MTND4P2-201ENST00000507767 1203 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 NDUFB4P2-201ENST00000509515 391 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC137800.2-201ENST00000574375 120 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 MIR5004-201ENST00000579078 107 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC012493.2-201ENST00000595083 291 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AP000860.1-201ENST00000605250 559 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC013476.2-201ENST00000614456 459 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDK3Q00526 SNHG22-203ENST00000617833 660 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 MIR8057-201ENST00000620957 69 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
CDK3Q00526 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CDK3Q00526 AP001148.1-201ENST00000624124 2359 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDK3Q00526 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDK3Q00526 GNG5P1-201ENST00000255500 204 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 OR1S2-201ENST00000302592 978 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK3Q00526 Y_RNA.201-201ENST00000364052 96 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 RN7SKP140-201ENST00000411196 284 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK3Q00526 AC009237.5-201ENST00000414271 501 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
CDK3Q00526 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK3Q00526 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK3Q00526 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK3Q00526 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.2□□□□□ -1.9
CDK3Q00526 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.2□□□□□ -1.9
CDK3Q00526 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.2□□□□□ -1.9
CDK3Q00526 MTND1P27-201ENST00000451117 902 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 AL359385.1-201ENST00000456509 365 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 RNA5SP310-201ENST00000459084 116 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 RPS20P20-201ENST00000460498 340 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 LARP1BP2-201ENST00000486594 519 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 AC010587.1-201ENST00000505809 469 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 AC022447.1-201ENST00000515358 464 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 SNORA74D-201ENST00000516404 141 ntBASIC3.2□□□□□ -1.9
CDK3Q00526 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms