Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC104472.2-201ENST00000469035 601 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AC010683.1-201ENST00000473673 378 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 RNU4-60P-201ENST00000517239 135 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AC007375.1-201ENST00000554513 578 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.89□□□□□ -2.27
PRKDCP78527 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
PRKDCP78527 RNU2-71P-201ENST00000411395 189 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.89□□□□□ -2.27
PRKDCP78527 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
PRKDCP78527 AC025755.1-201ENST00000521306 278 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 DUXAP4-201ENST00000603046 613 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AC073413.2-201ENST00000604332 360 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 AC011330.2-201ENST00000621680 635 ntBASIC0.89□□□□□ -2.27
PRKDCP78527 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
PRKDCP78527 MIR524-201ENST00000385242 87 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.88□□□□□ -2.27
PRKDCP78527 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.88□□□□□ -2.27
PRKDCP78527 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.88□□□□□ -2.27
PRKDCP78527 IFNA20P-201ENST00000436840 528 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.88□□□□□ -2.27
PRKDCP78527 AL035407.2-201ENST00000454090 378 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 RPL21P104-201ENST00000464143 478 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 MIR92A2-201ENST00000385299 75 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.88□□□□□ -2.27
PRKDCP78527 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.88□□□□□ -2.27
PRKDCP78527 ARPC3P2-201ENST00000457786 533 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 RPL21P131-201ENST00000497298 483 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 RNU1-92P-201ENST00000517017 135 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 MIR3935-201ENST00000583472 104 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 AC145207.9-201ENST00000623802 325 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.88□□□□□ -2.27
PRKDCP78527 TEX21P-201ENST00000447107 1476 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
PRKDCP78527 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
PRKDCP78527 AC010735.1-201ENST00000567305 1026 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 AL512605.2-201ENST00000592972 256 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.88□□□□□ -2.27
PRKDCP78527 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
PRKDCP78527 MTND5P9-201ENST00000503854 1755 ntBASIC0.88□□□□□ -2.27
PRKDCP78527 TATDN1P1-201ENST00000414123 891 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AC114973.1-201ENST00000429057 632 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.87□□□□□ -2.27
PRKDCP78527 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.87□□□□□ -2.27
PRKDCP78527 AP001029.3-201ENST00000588063 596 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AC009220.3-201ENST00000604318 586 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 RNA5SP105-201ENST00000391123 113 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 CCNB2P1-201ENST00000399411 1150 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 ELOCP10-201ENST00000440624 327 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.87□□□□□ -2.27
PRKDCP78527 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.87□□□□□ -2.27
PRKDCP78527 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
PRKDCP78527 AC091057.2-201ENST00000602594 792 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 ELOCP34-201ENST00000604436 327 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AL355816.1-201ENST00000607951 118 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 MIR7974-201ENST00000615835 79 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
PRKDCP78527 MTND4LP13-201ENST00000425022 298 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 CBX3P6-201ENST00000430257 527 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 MTCO1P43-201ENST00000431831 488 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 RPS15AP7-201ENST00000439294 405 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AC023050.1-201ENST00000498198 304 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.87□□□□□ -2.27
PRKDCP78527 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.87□□□□□ -2.27
PRKDCP78527 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.87□□□□□ -2.27
PRKDCP78527 AL136520.1-201ENST00000600311 1322 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.87□□□□□ -2.27
PRKDCP78527 AL590233.1-201ENST00000430017 456 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 HMGN2P20-201ENST00000437531 273 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AL445687.1-201ENST00000439946 251 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 OR9N1P-202ENST00000494289 481 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AC110792.2-201ENST00000510278 224 ntBASIC0.87□□□□□ -2.27
PRKDCP78527 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.87□□□□□ -2.27
PRKDCP78527 RN7SKP51-201ENST00000410781 304 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.86□□□□□ -2.27
PRKDCP78527 AC123912.5-201ENST00000605470 343 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.86□□□□□ -2.27
PRKDCP78527 ZNF33CP-201ENST00000432492 2030 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 AL591212.2-201ENST00000433923 257 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.86□□□□□ -2.27
PRKDCP78527 AC096571.1-202ENST00000506634 735 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.86□□□□□ -2.27
PRKDCP78527 SNORD59.2-201ENST00000516873 68 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
PRKDCP78527 RNF6P1-201ENST00000444889 1784 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.86□□□□□ -2.27
PRKDCP78527 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PRKDCP78527 SNORA51.2-201ENST00000364595 132 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 OR1L1-202ENST00000373686 1083 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 HMGB1P49-201ENST00000418882 569 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.86□□□□□ -2.27
PRKDCP78527 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.86□□□□□ -2.27
PRKDCP78527 OSBPL9P3-201ENST00000534523 595 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 CENPUP2-201ENST00000555897 1186 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.86□□□□□ -2.27
PRKDCP78527 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
PRKDCP78527 CR848007.2-201ENST00000424918 787 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms