Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 TMSB10P2-201ENST00000416049 131 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 BX842559.1-201ENST00000419615 532 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 ZNF863P-201ENST00000426746 417 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC006946.1-201ENST00000429106 328 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 OR4C10P-201ENST00000434991 931 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 HSFY6P-201ENST00000445573 403 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC104058.1-201ENST00000448028 297 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 RNU6-333P-201ENST00000459117 107 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC041039.1-201ENST00000485656 536 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AP002812.1-201ENST00000495378 474 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 AC090281.1-201ENST00000523019 276 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AP003730.1-201ENST00000524605 285 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX6-1P78426 AC078814.3-201ENST00000553036 491 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 MIR4424-201ENST00000585257 86 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX6-1P78426 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 MIR7154-201ENST00000620673 73 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 RNA5SP196-201ENST00000625967 102 ntBASIC3.88□□□□□ -1.79
NKX6-1P78426 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX6-1P78426 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX6-1P78426 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX6-1P78426 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX6-1P78426 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX6-1P78426 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX6-1P78426 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 LINC02471-203ENST00000641941 4752 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 Y_RNA.279-201ENST00000364763 95 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 SNORA62.3-201ENST00000365110 153 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 RNA5SP366-201ENST00000365454 123 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 RHOT1P2-201ENST00000366423 333 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 MIR514A2-201ENST00000385131 88 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 MIR514A3-201ENST00000385132 88 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 AL022722.2-201ENST00000402519 180 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AL592114.1-201ENST00000403842 483 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 PPIAP31-201ENST00000405422 495 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AL162578.1-201ENST00000406202 378 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 RN7SKP202-201ENST00000410439 330 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 RAC1P3-201ENST00000416129 580 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 CYP4F29P-201ENST00000420685 446 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC245054.1-201ENST00000420944 258 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC091390.3-201ENST00000426478 338 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX6-1P78426 HMGB1P12-201ENST00000438594 598 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AL353748.1-201ENST00000440753 474 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 SCARNA18-201ENST00000459004 134 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC007547.1-201ENST00000462177 490 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 RN7SL98P-201ENST00000462271 300 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AL160314.1-201ENST00000490836 438 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.87□□□□□ -1.79
NKX6-1P78426 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.87□□□□□ -1.79
NKX6-1P78426 RN7SKP289-201ENST00000517244 295 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.87□□□□□ -1.79
NKX6-1P78426 AC023632.4-201ENST00000517783 191 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 PSMA2P1-201ENST00000526365 646 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.87□□□□□ -1.79
NKX6-1P78426 AC104260.1-201ENST00000616660 539 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC022306.2-201ENST00000617563 647 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 AC048347.1-201ENST00000624621 427 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 MIR3653-201ENST00000625572 110 ntBASIC3.87□□□□□ -1.79
NKX6-1P78426 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NKX6-1P78426 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
NKX6-1P78426 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NKX6-1P78426 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.87□□□□□ -1.79
NKX6-1P78426 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NKX6-1P78426 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NKX6-1P78426 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX6-1P78426 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX6-1P78426 SPRR2C-201ENST00000290702 219 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX6-1P78426 Y_RNA.70-201ENST00000362886 110 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RNU6-1167P-201ENST00000363227 94 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RN7SKP280-201ENST00000364196 304 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RNA5SP513-201ENST00000364648 118 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RNU4-20P-201ENST00000365601 151 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX6-1P78426 RNU6-767P-201ENST00000384132 107 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RNU1-13P-201ENST00000384499 162 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 MIR93-201ENST00000385024 80 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RNU6-1009P-201ENST00000390996 107 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RPL21P91-201ENST00000429231 479 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 USP9YP8-201ENST00000441913 500 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX6-1P78426 AC009237.8-201ENST00000445492 379 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RPL7P12-201ENST00000446719 750 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AL451050.1-201ENST00000450126 415 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms