Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-398P-201ENST00000384143 109 ntBASIC4.48□□□□□ -1.69
YBX1P67809 RNU6-434P-201ENST00000384376 107 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AL445189.1-201ENST00000405722 338 ntBASIC4.48□□□□□ -1.69
YBX1P67809 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.48□□□□□ -1.69
YBX1P67809 RPL17P36-201ENST00000420302 549 ntBASIC4.48□□□□□ -1.69
YBX1P67809 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.48□□□□□ -1.69
YBX1P67809 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 PTMAP3-201ENST00000447474 330 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.48□□□□□ -1.69
YBX1P67809 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.48□□□□□ -1.69
YBX1P67809 AC117503.1-201ENST00000472241 394 ntBASIC4.48□□□□□ -1.69
YBX1P67809 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.48□□□□□ -1.69
YBX1P67809 RNU6-307P-201ENST00000516743 106 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.48□□□□□ -1.69
YBX1P67809 HSBP1P1-201ENST00000555205 166 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.48□□□□□ -1.69
YBX1P67809 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 HNRNPCP4-201ENST00000571636 900 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AL355297.3-201ENST00000604082 446 ntBASIC4.48□□□□□ -1.69
YBX1P67809 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.48□□□□□ -1.69
YBX1P67809 MIR6780A-201ENST00000615089 68 ntBASIC4.48□□□□□ -1.69
YBX1P67809 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
YBX1P67809 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
YBX1P67809 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
YBX1P67809 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 AL391684.1-202ENST00000641293 1636 ntBASIC4.47□□□□□ -1.69
YBX1P67809 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.47□□□□□ -1.69
YBX1P67809 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 Y_RNA.39-201ENST00000362620 98 ntBASIC4.47□□□□□ -1.69
YBX1P67809 Y_RNA.210-201ENST00000364161 110 ntBASIC4.47□□□□□ -1.69
YBX1P67809 Y_RNA.288-201ENST00000364854 92 ntBASIC4.47□□□□□ -1.69
YBX1P67809 RNU6-715P-201ENST00000365204 103 ntBASIC4.47□□□□□ -1.69
YBX1P67809 Y_RNA.380-201ENST00000365663 111 ntBASIC4.47□□□□□ -1.69
YBX1P67809 RNU6-754P-201ENST00000391166 107 ntBASIC4.47□□□□□ -1.69
YBX1P67809 MIR548I3-201ENST00000408378 149 ntBASIC4.47□□□□□ -1.69
YBX1P67809 MIR548I1-201ENST00000408810 149 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.47□□□□□ -1.69
YBX1P67809 AC008065.1-201ENST00000428525 348 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AC068287.1-201ENST00000430283 295 ntBASIC4.47□□□□□ -1.69
YBX1P67809 DYNLT3P2-201ENST00000442517 295 ntBASIC4.47□□□□□ -1.69
YBX1P67809 OSTCP8-201ENST00000445117 448 ntBASIC4.47□□□□□ -1.69
YBX1P67809 H2AFZP5-201ENST00000446960 382 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AC096745.1-201ENST00000509945 370 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.47□□□□□ -1.69
YBX1P67809 RNU2-69P-201ENST00000516061 100 ntBASIC4.47□□□□□ -1.69
YBX1P67809 RNU6-475P-201ENST00000516073 104 ntBASIC4.47□□□□□ -1.69
YBX1P67809 RNU4-77P-201ENST00000516692 156 ntBASIC4.47□□□□□ -1.69
YBX1P67809 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.47□□□□□ -1.69
YBX1P67809 AC131281.1-201ENST00000522984 164 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.47□□□□□ -1.69
YBX1P67809 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 BNIP3P5-201ENST00000562290 498 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.47□□□□□ -1.69
YBX1P67809 RN7SL690P-201ENST00000582087 240 ntBASIC4.47□□□□□ -1.69
YBX1P67809 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 AC011494.1-201ENST00000596454 237 ntBASIC4.47□□□□□ -1.69
YBX1P67809 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
YBX1P67809 SNHG22-203ENST00000617833 660 ntBASIC4.47□□□□□ -1.69
YBX1P67809 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.47□□□□□ -1.69
YBX1P67809 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
YBX1P67809 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.47□□□□□ -1.69
YBX1P67809 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
YBX1P67809 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.47□□□□□ -1.69
YBX1P67809 AL049555.1-201ENST00000562834 1933 ntBASIC4.46□□□□□ -1.69
YBX1P67809 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.46□□□□□ -1.69
YBX1P67809 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
YBX1P67809 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
YBX1P67809 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
YBX1P67809 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.46□□□□□ -1.7
YBX1P67809 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.46□□□□□ -1.7
YBX1P67809 SMIM11P1-201ENST00000369586 178 ntBASIC4.46□□□□□ -1.7
YBX1P67809 SNORA70F-201ENST00000384142 135 ntBASIC4.46□□□□□ -1.7
YBX1P67809 SNORD51-201ENST00000384320 80 ntBASIC4.46□□□□□ -1.7
YBX1P67809 RNU6-713P-201ENST00000384761 107 ntBASIC4.46□□□□□ -1.7
YBX1P67809 MIR298-201ENST00000401212 88 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms