Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC128657.1-201ENST00000549459 145 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AL121603.1-201ENST00000553815 142 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A1P61619 AL133153.1-201ENST00000557756 303 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.35□□□□□ -1.87
SEC61A1P61619 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A1P61619 AP001029.3-201ENST00000588063 596 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 AP001429.1-201ENST00000602568 530 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 AC100810.6-201ENST00000638068 285 ntBASIC3.35□□□□□ -1.87
SEC61A1P61619 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A1P61619 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A1P61619 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.35□□□□□ -1.87
SEC61A1P61619 AC092326.2-201ENST00000624772 1561 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SEC61A1P61619 RPL7P26-201ENST00000333817 754 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 Y_RNA.279-201ENST00000364763 95 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 Y_RNA.367-201ENST00000365544 101 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 RNU6-278P-201ENST00000390945 109 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 HLFP1-201ENST00000402375 499 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL590704.1-201ENST00000402856 794 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 RNU2-62P-201ENST00000410868 191 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 RPL7AP73-201ENST00000413490 353 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.34□□□□□ -1.87
SEC61A1P61619 SNRPEP10-201ENST00000420249 274 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC245054.1-201ENST00000420944 258 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC018630.2-202ENST00000422992 927 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.34□□□□□ -1.87
SEC61A1P61619 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SEC61A1P61619 HMGB1P37-201ENST00000439613 609 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A1P61619 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A1P61619 SNRPGP6-201ENST00000451124 220 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC108059.3-201ENST00000456388 214 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 MTND1P11-201ENST00000456661 876 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL136097.1-201ENST00000456945 913 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A1P61619 AC010285.1-201ENST00000470580 392 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC078785.3-201ENST00000476607 425 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A1P61619 AC026427.2-201ENST00000506228 536 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC026784.1-201ENST00000507986 352 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.34□□□□□ -1.87
SEC61A1P61619 PCBP2P3-201ENST00000509726 843 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.34□□□□□ -1.87
SEC61A1P61619 OR5B19P-201ENST00000531766 928 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.34□□□□□ -1.87
SEC61A1P61619 AL138976.2-201ENST00000563989 694 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC055876.1-202ENST00000567053 138 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 HMGB1P6-201ENST00000569046 646 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC010525.2-201ENST00000590920 195 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL117336.2-201ENST00000602435 335 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL356055.1-201ENST00000602528 446 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL592436.1-201ENST00000605135 558 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AL158211.4-201ENST00000606988 584 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC004908.2-201ENST00000609090 574 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 TUG1_1.1-201ENST00000610654 145 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 AC006504.8-201ENST00000621046 635 ntBASIC3.34□□□□□ -1.87
SEC61A1P61619 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
SEC61A1P61619 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A1P61619 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SEC61A1P61619 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SEC61A1P61619 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SEC61A1P61619 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
SEC61A1P61619 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.33□□□□□ -1.88
SEC61A1P61619 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SEC61A1P61619 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A1P61619 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SEC61A1P61619 RN7SKP44-201ENST00000363602 316 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 Y_RNA.356-201ENST00000365475 113 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SEC61A1P61619 AL391417.1-201ENST00000404100 426 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.33□□□□□ -1.88
SEC61A1P61619 AL513185.2-201ENST00000425543 193 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.33□□□□□ -1.88
SEC61A1P61619 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.33□□□□□ -1.88
SEC61A1P61619 ATP5JP1-201ENST00000431631 322 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 RPS20P5-201ENST00000434808 360 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.33□□□□□ -1.88
SEC61A1P61619 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.33□□□□□ -1.88
SEC61A1P61619 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.33□□□□□ -1.88
SEC61A1P61619 AC079781.2-201ENST00000446424 169 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.33□□□□□ -1.88
SEC61A1P61619 RNU7-170P-201ENST00000459303 61 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 RNU6-261P-201ENST00000459506 102 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 AP000873.1-201ENST00000463987 400 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 AC135721.1-201ENST00000497954 479 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 HSPD1P15-201ENST00000505573 1122 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 HMGB1P41-201ENST00000520234 440 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 AP003072.2-201ENST00000527756 676 ntBASIC3.33□□□□□ -1.88
SEC61A1P61619 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms