Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS3AP61247 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS3AP61247 Z74696.2-201ENST00000436514 498 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 HIGD1AP11-201ENST00000438361 280 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC073614.1-201ENST00000438690 650 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS3AP61247 NOTCH2P1-201ENST00000443481 624 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC244505.5-201ENST00000443639 207 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 MTND1P29-201ENST00000448112 647 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS3AP61247 KC877373.1-201ENST00000479066 408 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.4□□□□□ -1.87
RPS3AP61247 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS3AP61247 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.4□□□□□ -1.87
RPS3AP61247 SAP18P1-201ENST00000512058 390 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPS3AP61247 Vault.3-201ENST00000516676 95 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 RNU6-352P-201ENST00000516908 107 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 RNU6-1092P-201ENST00000516955 87 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AP006587.4-201ENST00000526053 529 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS3AP61247 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS3AP61247 HIGD1AP1-201ENST00000550979 275 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC034105.4-201ENST00000568304 277 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AL358072.1-201ENST00000604156 575 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC245008.1-201ENST00000608123 476 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC010678.1-201ENST00000614118 713 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC034102.8-201ENST00000615146 484 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AC244100.1-202ENST00000621554 382 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 AP003399.1-201ENST00000637534 361 ntBASIC3.4□□□□□ -1.87
RPS3AP61247 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.4□□□□□ -1.87
RPS3AP61247 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS3AP61247 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS3AP61247 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.4□□□□□ -1.87
RPS3AP61247 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPS3AP61247 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
RPS3AP61247 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPS3AP61247 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS3AP61247 Y_RNA.51-201ENST00000362725 102 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 RNY1P12-201ENST00000364251 105 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 RNU6-701P-201ENST00000384059 107 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 RNU6-1035P-201ENST00000384477 107 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPS3AP61247 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 RPS3AP36-201ENST00000398190 775 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 RN7SKP27-201ENST00000410684 333 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AC127391.1-201ENST00000411737 98 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AC126124.2-201ENST00000413542 321 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 AC007283.2-201ENST00000424739 197 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 HMGB1P27-201ENST00000431429 603 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AC010153.1-201ENST00000432862 727 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 SNRPGP6-201ENST00000451124 220 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AL133162.1-201ENST00000463228 453 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 SNORD59.2-201ENST00000516873 68 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 AC006362.1-201ENST00000567392 174 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.39□□□□□ -1.87
RPS3AP61247 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 AL133173.2-201ENST00000614270 90 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RPS3AP61247 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.39□□□□□ -1.87
RPS3AP61247 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
RPS3AP61247 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
RPS3AP61247 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
RPS3AP61247 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.38□□□□□ -1.87
RPS3AP61247 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPS3AP61247 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RPS3AP61247 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.38□□□□□ -1.87
RPS3AP61247 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
RPS3AP61247 RNU6-960P-201ENST00000364056 120 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 SNORA20.2-201ENST00000383922 131 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 SNORA75-201ENST00000384158 137 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPS3AP61247 RNA5SP424-201ENST00000390988 115 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 C1DP2-201ENST00000418167 426 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.38□□□□□ -1.87
RPS3AP61247 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AC018644.1-201ENST00000429934 551 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AL445584.1-201ENST00000431451 330 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AC104850.1-201ENST00000435940 476 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.38□□□□□ -1.87
RPS3AP61247 ARPC3P1-201ENST00000437218 533 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 HMGB3P12-201ENST00000438745 556 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AL133547.1-201ENST00000448546 220 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.38□□□□□ -1.87
RPS3AP61247 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.38□□□□□ -1.87
RPS3AP61247 MTCO2P18-201ENST00000457151 658 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms