Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
RHBDL3P58872 RNU1-18P-201ENST00000363062 164 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 HMGN1P14-201ENST00000412459 517 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 SEPT2P1-201ENST00000419651 180 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 RAC1P6-201ENST00000423911 575 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AL033528.1-201ENST00000453780 140 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDL3P58872 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AC068647.1-201ENST00000489539 2265 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AC099489.2-201ENST00000574976 260 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDL3P58872 AL391813.2-201ENST00000609113 322 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC107294.1-201ENST00000609524 467 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC073114.1-201ENST00000612027 490 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 AC004852.3-201ENST00000614131 326 ntBASIC4.08□□□□□ -1.76
RHBDL3P58872 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDL3P58872 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDL3P58872 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDL3P58872 ELL2P3-201ENST00000457883 1602 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDL3P58872 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.07□□□□□ -1.76
RHBDL3P58872 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDL3P58872 RNA5SP197-201ENST00000363357 119 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 NDUFS5P1-201ENST00000405668 289 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDL3P58872 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC006989.1-201ENST00000427212 131 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 TAF9P1-201ENST00000445421 515 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 RPS27AP8-201ENST00000452665 445 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 TAF9P2-201ENST00000454958 515 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC010099.1-201ENST00000455434 375 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDL3P58872 MTND4LP3-201ENST00000468320 276 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 FCF1P8-201ENST00000510322 597 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 RNA5SP290-201ENST00000517133 127 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 RPL21P12-201ENST00000559810 515 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AL360157.1-201ENST00000565962 87 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDL3P58872 MIR548AB-201ENST00000584917 84 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC009977.1-201ENST00000586015 570 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDL3P58872 AC012493.2-201ENST00000595083 291 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC005000.2-201ENST00000605468 310 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC034102.8-201ENST00000615146 484 ntBASIC4.07□□□□□ -1.76
RHBDL3P58872 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDL3P58872 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDL3P58872 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RHBDL3P58872 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
RHBDL3P58872 AC032011.1-201ENST00000611703 1549 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 HSPE1P11-201ENST00000339579 310 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDL3P58872 RNU6-217P-201ENST00000384164 104 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 RNA5SP252-201ENST00000391131 119 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 SNORA48.8-201ENST00000391324 134 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 SAR1AP2-201ENST00000392696 594 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.06□□□□□ -1.76
RHBDL3P58872 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDL3P58872 FCF1P1-201ENST00000432690 571 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 RPS29P31-201ENST00000446147 164 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDL3P58872 SNRPGP6-201ENST00000451124 220 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 AL031183.1-201ENST00000457667 207 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 LARP1BP2-201ENST00000486594 519 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 AC010587.1-201ENST00000505809 469 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 MTND4LP22-201ENST00000508209 276 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.06□□□□□ -1.76
RHBDL3P58872 DNAJC8P1-201ENST00000554535 372 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 AC005771.1-201ENST00000585581 349 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.06□□□□□ -1.76
RHBDL3P58872 AC025594.3-201ENST00000613068 790 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 AC099654.13-201ENST00000639774 207 ntBASIC4.06□□□□□ -1.76
RHBDL3P58872 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RHBDL3P58872 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDL3P58872 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RHBDL3P58872 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.06□□□□□ -1.76
RHBDL3P58872 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.06□□□□□ -1.76
RHBDL3P58872 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDL3P58872 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDL3P58872 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.05□□□□□ -1.76
RHBDL3P58872 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RHBDL3P58872 GNG5P1-201ENST00000255500 204 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 U3.4-201ENST00000363352 213 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 RNU6-511P-201ENST00000363496 107 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 RNY1P12-201ENST00000364251 105 ntBASIC4.05□□□□□ -1.76
RHBDL3P58872 Y_RNA.245-201ENST00000364493 95 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms