Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC005539.1-201ENST00000443768 1479 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CLDN6P56747 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN6P56747 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AL079342.1-201ENST00000401460 267 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AC080125.1-201ENST00000414888 684 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 ARF4P4-201ENST00000439608 520 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN6P56747 AP000705.1-201ENST00000454567 350 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN6P56747 NAMPTP2-201ENST00000505629 1115 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 TBCAP3-201ENST00000512475 312 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AC093677.1-201ENST00000514414 678 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 RNU6-991P-201ENST00000516168 107 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 RPPH1-2P-201ENST00000516688 293 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 RNU6-1282P-201ENST00000516735 96 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 RNU6-528P-201ENST00000516926 100 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.34□□□□□ -2.03
CLDN6P56747 AP002748.2-201ENST00000528671 348 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN6P56747 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN6P56747 AC087894.1-201ENST00000538359 518 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN6P56747 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 OR1M4P-201ENST00000589199 287 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN6P56747 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN6P56747 AC140725.3-201ENST00000616193 880 ntBASIC2.34□□□□□ -2.03
CLDN6P56747 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN6P56747 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.34□□□□□ -2.03
CLDN6P56747 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN6P56747 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN6P56747 AC007785.2-201ENST00000598627 1916 ntBASIC2.34□□□□□ -2.04
CLDN6P56747 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN6P56747 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN6P56747 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
CLDN6P56747 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CLDN6P56747 RNU6-28P-201ENST00000362378 107 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN6P56747 RNU1-73P-201ENST00000383971 164 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 MTND4P13-201ENST00000402078 1023 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN6P56747 AL139421.1-201ENST00000423010 169 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 PPP1R11P2-201ENST00000423543 382 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN6P56747 PTGES3P1-201ENST00000439531 483 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 MTCYBP42-201ENST00000444653 1130 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 BMI1P1-201ENST00000445879 941 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 RPS15AP27-201ENST00000449183 343 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN6P56747 RPL9P6-201ENST00000492764 598 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC114981.1-201ENST00000503897 678 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN6P56747 MRPS36P2-201ENST00000512569 299 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC087808.1-201ENST00000520501 361 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN6P56747 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN6P56747 AL356575.1-201ENST00000603008 283 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC011451.2-201ENST00000604303 598 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AL390208.1-201ENST00000605885 644 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 BX664608.1-201ENST00000610519 487 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC243773.3-201ENST00000613270 256 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 AC018926.1-201ENST00000616335 435 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 CR848007.1-201ENST00000442354 1699 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CLDN6P56747 AL022578.1-201ENST00000439330 1433 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CLDN6P56747 CDR1-202ENST00000625883 1485 ntBASIC2.33□□□□□ -2.04
CLDN6P56747 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN6P56747 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN6P56747 AP005901.5-201ENST00000545779 1796 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN6P56747 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN6P56747 SNORA63.3-201ENST00000362682 132 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 SNORD114-1-201ENST00000362705 72 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN6P56747 USP9YP19-201ENST00000412165 485 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 MTCO2P5-201ENST00000422621 426 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 RPS15AP7-201ENST00000439294 405 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 FGF7P5-201ENST00000441829 291 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AC096638.1-201ENST00000444678 216 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN6P56747 RPL23AP20-201ENST00000447965 421 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CLDN6P56747 TRGVB-201ENST00000453257 471 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 RPL21P99-201ENST00000480369 423 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN6P56747 LARP1BP2-201ENST00000486594 519 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN6P56747 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 NDUFS5P6-201ENST00000529136 295 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN6P56747 GLYCAM1-201ENST00000546596 285 ntBASIC2.32□□□□□ -2.04
CLDN6P56747 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms