Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC093303.1-201ENST00000514549 295 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 Y_RNA.682-201ENST00000516457 100 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 RNU6-273P-201ENST00000516937 96 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 PTP4A1P6-201ENST00000531034 478 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXG1P55316 APOOP3-201ENST00000536787 586 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 YPEL5P3-201ENST00000547227 352 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.5□□□□□ -1.85
FOXG1P55316 AL161713.1-201ENST00000555538 145 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 MIR3146-201ENST00000580367 79 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 AC053481.4-201ENST00000583164 216 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 MIR3149-201ENST00000584629 83 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 AC067852.4-201ENST00000590314 478 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 AC104662.1-201ENST00000604448 511 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 CTHRC1P1-201ENST00000605383 469 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXG1P55316 AC087588.2-201ENST00000617667 426 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
FOXG1P55316 AC244517.12-201ENST00000623581 663 ntBASIC3.5□□□□□ -1.85
FOXG1P55316 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXG1P55316 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
FOXG1P55316 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXG1P55316 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
FOXG1P55316 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXG1P55316 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXG1P55316 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXG1P55316 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXG1P55316 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
FOXG1P55316 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXG1P55316 AC007685.1-201ENST00000329806 452 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 Y_RNA.28-201ENST00000362554 111 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 RNU4-66P-201ENST00000365199 138 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 Y_RNA.339-201ENST00000365325 102 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 RNU6-38P-201ENST00000384085 107 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 RNU6-39P-201ENST00000384344 107 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 MIR514A2-201ENST00000385131 88 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 MIR514A3-201ENST00000385132 88 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
FOXG1P55316 MIR548F5-201ENST00000408421 86 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXG1P55316 EIF4EP1-201ENST00000422311 642 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC096632.1-201ENST00000427395 310 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 OR4K11P-201ENST00000431829 904 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXG1P55316 Y_RNA.635-201ENST00000459041 101 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 RNU6-333P-201ENST00000459117 107 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 FTH1P2-201ENST00000466086 412 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC083904.1-201ENST00000487828 231 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXG1P55316 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXG1P55316 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXG1P55316 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXG1P55316 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXG1P55316 SNRPGP18-201ENST00000553000 214 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC106785.1-201ENST00000565935 262 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXG1P55316 OR4K8P-201ENST00000578842 1048 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 MIR4458-201ENST00000578872 75 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.49□□□□□ -1.85
FOXG1P55316 AL022345.1-201ENST00000607292 135 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC004908.2-201ENST00000609090 574 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AL442067.1-201ENST00000613261 223 ntBASIC3.49□□□□□ -1.85
FOXG1P55316 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXG1P55316 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FOXG1P55316 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXG1P55316 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXG1P55316 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXG1P55316 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXG1P55316 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
FOXG1P55316 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXG1P55316 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXG1P55316 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXG1P55316 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXG1P55316 OR1S2-201ENST00000302592 978 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 AL161781.1-201ENST00000354277 403 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 Y_RNA.100-201ENST00000363141 102 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 RNU5E-8P-201ENST00000363502 116 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 Y_RNA.367-201ENST00000365544 101 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 RNU4-48P-201ENST00000365559 182 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 MIR649-201ENST00000384843 97 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 AL592114.1-201ENST00000403842 483 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 AL359634.1-202ENST00000404721 284 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 RNU6-193P-201ENST00000410977 107 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXG1P55316 AC008065.1-201ENST00000428525 348 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 USP9YP16-201ENST00000430287 407 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 RPL36P19-201ENST00000430744 301 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.48□□□□□ -1.85
FOXG1P55316 RPS20P5-201ENST00000434808 360 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXG1P55316 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXG1P55316 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.48□□□□□ -1.85
FOXG1P55316 USP9YP23-201ENST00000455085 407 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 RNU7-152P-201ENST00000458982 64 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 snoU13.7-201ENST00000459220 104 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 PPIAP15-201ENST00000479662 484 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 RPL31P61-201ENST00000496160 376 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 AC146944.2-203ENST00000502493 354 ntBASIC3.48□□□□□ -1.85
FOXG1P55316 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
FOXG1P55316 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms