Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL355810.1-201ENST00000614629 552 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AL603758.1-201ENST00000618654 241 ntBASIC3.15□□□□□ -1.91
CDH11P55287 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.15□□□□□ -1.91
CDH11P55287 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CDH11P55287 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH11P55287 MTND5P26-201ENST00000426018 1752 ntBASIC3.15□□□□□ -1.91
CDH11P55287 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH11P55287 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDH11P55287 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 AC116096.1-201ENST00000566804 2314 ntBASIC3.14□□□□□ -1.91
CDH11P55287 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH11P55287 AC007823.1-201ENST00000569932 1566 ntBASIC3.14□□□□□ -1.91
CDH11P55287 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH11P55287 SNORD9-201ENST00000362566 104 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNU6-511P-201ENST00000363496 107 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNY3P13-201ENST00000365542 102 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNU6-259P-201ENST00000383999 107 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNU6-1181P-201ENST00000384191 106 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC104651.1-201ENST00000427559 735 ntBASIC3.14□□□□□ -1.91
CDH11P55287 ISCA1P6-201ENST00000427740 390 ntBASIC3.14□□□□□ -1.91
CDH11P55287 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH11P55287 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 CYCSP43-201ENST00000438233 310 ntBASIC3.14□□□□□ -1.91
CDH11P55287 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH11P55287 RPL21P23-201ENST00000446654 460 ntBASIC3.14□□□□□ -1.91
CDH11P55287 GAPDHP27-201ENST00000447427 1020 ntBASIC3.14□□□□□ -1.91
CDH11P55287 NANOGNBP1-201ENST00000448444 480 ntBASIC3.14□□□□□ -1.91
CDH11P55287 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 AL359385.1-201ENST00000456509 365 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH11P55287 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 AC004924.1-201ENST00000480160 781 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RN7SL293P-201ENST00000481765 281 ntBASIC3.14□□□□□ -1.91
CDH11P55287 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 AC026801.2-201ENST00000515352 425 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNA5SP337-201ENST00000517007 109 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNU6-64P-201ENST00000517119 105 ntBASIC3.14□□□□□ -1.91
CDH11P55287 RNU6-1073P-201ENST00000517182 106 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 AP003392.2-201ENST00000527269 208 ntBASIC3.14□□□□□ -1.91
CDH11P55287 OR5B10P-201ENST00000532869 642 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.14□□□□□ -1.91
CDH11P55287 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 AC010546.1-201ENST00000569391 485 ntBASIC3.14□□□□□ -1.91
CDH11P55287 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH11P55287 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH11P55287 MIR3922-201ENST00000585192 84 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC068790.6-201ENST00000602558 258 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC073648.5-201ENST00000603502 305 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AL021997.1-201ENST00000605757 193 ntBASIC3.14□□□□□ -1.91
CDH11P55287 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH11P55287 AC004492.1-201ENST00000607036 742 ntBASIC3.14□□□□□ -1.91
CDH11P55287 AC110994.2-201ENST00000635481 492 ntBASIC3.14□□□□□ -1.91
CDH11P55287 U6.105-201ENST00000637379 88 ntBASIC3.14□□□□□ -1.91
CDH11P55287 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CDH11P55287 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH11P55287 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH11P55287 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH11P55287 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH11P55287 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH11P55287 Y_RNA.3-201ENST00000362331 103 ntBASIC3.13□□□□□ -1.91
CDH11P55287 RNU6-223P-201ENST00000362830 107 ntBASIC3.13□□□□□ -1.91
CDH11P55287 RNU6-432P-201ENST00000384196 109 ntBASIC3.13□□□□□ -1.91
CDH11P55287 SNORA36C-201ENST00000384289 132 ntBASIC3.13□□□□□ -1.91
CDH11P55287 MIR34B-201ENST00000385076 84 ntBASIC3.13□□□□□ -1.91
CDH11P55287 RNU6-192P-201ENST00000391253 100 ntBASIC3.13□□□□□ -1.91
CDH11P55287 RPS3AP36-201ENST00000398190 775 ntBASIC3.13□□□□□ -1.91
CDH11P55287 Y_RNA.599-201ENST00000410489 109 ntBASIC3.13□□□□□ -1.91
CDH11P55287 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH11P55287 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH11P55287 BX295541.1-201ENST00000417774 250 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC245291.1-201ENST00000419501 328 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC007283.2-201ENST00000424739 197 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH11P55287 AC024082.2-201ENST00000434771 238 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC016696.1-201ENST00000446949 318 ntBASIC3.13□□□□□ -1.91
CDH11P55287 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH11P55287 PRDX3P3-201ENST00000447765 522 ntBASIC3.13□□□□□ -1.91
CDH11P55287 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC108059.3-201ENST00000456388 214 ntBASIC3.13□□□□□ -1.91
CDH11P55287 snoU13.4-201ENST00000458916 104 ntBASIC3.13□□□□□ -1.91
CDH11P55287 RBM43P1-201ENST00000476891 1081 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
CDH11P55287 RPS15AP36-201ENST00000492022 382 ntBASIC3.13□□□□□ -1.91
CDH11P55287 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 AC100870.1-201ENST00000522035 505 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 SNRPGP16-201ENST00000533275 226 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH11P55287 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 1062.7 ms