Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNA5SP505-201ENST00000364748 108 ntBASIC3.5□□□□□ -1.85
SOX2P48431 RNU4-66P-201ENST00000365199 138 ntBASIC3.5□□□□□ -1.85
SOX2P48431 TOMM22P1-201ENST00000418578 312 ntBASIC3.5□□□□□ -1.85
SOX2P48431 DUTP6-201ENST00000425573 462 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX2P48431 ERLEC1P1-201ENST00000433806 578 ntBASIC3.5□□□□□ -1.85
SOX2P48431 NEFMP1-201ENST00000443423 1006 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.5□□□□□ -1.85
SOX2P48431 AC020550.1-201ENST00000447385 163 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.5□□□□□ -1.85
SOX2P48431 ELOCP23-201ENST00000452014 332 ntBASIC3.5□□□□□ -1.85
SOX2P48431 FABP5P13-201ENST00000452144 328 ntBASIC3.5□□□□□ -1.85
SOX2P48431 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.5□□□□□ -1.85
SOX2P48431 RPS24P6-201ENST00000452670 400 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.5□□□□□ -1.85
SOX2P48431 AL513533.1-201ENST00000453728 415 ntBASIC3.5□□□□□ -1.85
SOX2P48431 snoU13.24-201ENST00000458998 104 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.5□□□□□ -1.85
SOX2P48431 RPL23AP11-201ENST00000475260 469 ntBASIC3.5□□□□□ -1.85
SOX2P48431 RPL21P99-201ENST00000480369 423 ntBASIC3.5□□□□□ -1.85
SOX2P48431 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.5□□□□□ -1.85
SOX2P48431 RN7SL271P-201ENST00000487601 295 ntBASIC3.5□□□□□ -1.85
SOX2P48431 RPS23P1-201ENST00000491662 432 ntBASIC3.5□□□□□ -1.85
SOX2P48431 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.5□□□□□ -1.85
SOX2P48431 BTF3L4P4-201ENST00000506381 449 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC091885.1-201ENST00000506658 268 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX2P48431 MIR2114-201ENST00000516645 80 ntBASIC3.5□□□□□ -1.85
SOX2P48431 RNU6-352P-201ENST00000516908 107 ntBASIC3.5□□□□□ -1.85
SOX2P48431 IGKV2D-23-201ENST00000518179 286 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.5□□□□□ -1.85
SOX2P48431 AP006587.4-201ENST00000526053 529 ntBASIC3.5□□□□□ -1.85
SOX2P48431 PSMA2P1-201ENST00000526365 646 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.5□□□□□ -1.85
SOX2P48431 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.5□□□□□ -1.85
SOX2P48431 AC005261.5-201ENST00000596280 355 ntBASIC3.5□□□□□ -1.85
SOX2P48431 BDH2P1-201ENST00000602288 736 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC174048.1-201ENST00000603389 144 ntBASIC3.5□□□□□ -1.85
SOX2P48431 AC110741.2-201ENST00000605278 268 ntBASIC3.5□□□□□ -1.85
SOX2P48431 RNU6-89P-201ENST00000606519 100 ntBASIC3.5□□□□□ -1.85
SOX2P48431 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SOX2P48431 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SOX2P48431 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SOX2P48431 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SOX2P48431 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SOX2P48431 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SOX2P48431 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SOX2P48431 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.49□□□□□ -1.85
SOX2P48431 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 RNU6-845P-201ENST00000362578 103 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RNU5A-1-201ENST00000362698 116 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RNA5SP447-201ENST00000363749 119 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RNU4-20P-201ENST00000365601 151 ntBASIC3.49□□□□□ -1.85
SOX2P48431 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SOX2P48431 SNORA36C-201ENST00000384289 132 ntBASIC3.49□□□□□ -1.85
SOX2P48431 MIR514A2-201ENST00000385131 88 ntBASIC3.49□□□□□ -1.85
SOX2P48431 MIR514A3-201ENST00000385132 88 ntBASIC3.49□□□□□ -1.85
SOX2P48431 MT-TD-201ENST00000387419 68 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RNU4-25P-201ENST00000410569 230 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RNU4-46P-201ENST00000410818 138 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RPL30P2-201ENST00000414021 291 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RPL7P46-201ENST00000425129 740 ntBASIC3.49□□□□□ -1.85
SOX2P48431 FAR2P4-202ENST00000425399 584 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RPL7L1P10-201ENST00000427790 463 ntBASIC3.49□□□□□ -1.85
SOX2P48431 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RPL7P12-201ENST00000446719 750 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AL500522.2-201ENST00000448562 343 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AL162151.2-201ENST00000448875 158 ntBASIC3.49□□□□□ -1.85
SOX2P48431 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.49□□□□□ -1.85
SOX2P48431 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.49□□□□□ -1.85
SOX2P48431 HMGN2P26-201ENST00000463169 339 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RN7SL481P-201ENST00000477764 299 ntBASIC3.49□□□□□ -1.85
SOX2P48431 HSPE1P6-201ENST00000479457 291 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC108860.1-201ENST00000484521 383 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 RN7SKP258-201ENST00000517151 304 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC109635.4-202ENST00000531666 412 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC243972.3-201ENST00000539655 198 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC023050.3-201ENST00000541142 333 ntBASIC3.49□□□□□ -1.85
SOX2P48431 RAB11AP2-201ENST00000545905 639 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.49□□□□□ -1.85
SOX2P48431 AC078814.3-201ENST00000553036 491 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.49□□□□□ -1.85
SOX2P48431 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.49□□□□□ -1.85
SOX2P48431 RPL23AP84-201ENST00000571193 464 ntBASIC3.49□□□□□ -1.85
SOX2P48431 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
SOX2P48431 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.49□□□□□ -1.85
SOX2P48431 AC104763.2-201ENST00000604179 382 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AL365204.3-201ENST00000612448 685 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC093913.1-201ENST00000614178 329 ntBASIC3.49□□□□□ -1.85
SOX2P48431 MIR7703-201ENST00000620784 77 ntBASIC3.49□□□□□ -1.85
SOX2P48431 AC090617.10-201ENST00000624308 134 ntBASIC3.49□□□□□ -1.85
SOX2P48431 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SOX2P48431 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SOX2P48431 MTND4P29-201ENST00000503122 1372 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms