Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.46□□□□□ -2.02
RFX3P48380 ZNF886P-201ENST00000450781 723 ntBASIC2.46□□□□□ -2.02
RFX3P48380 MTND1P9-201ENST00000453775 944 ntBASIC2.46□□□□□ -2.02
RFX3P48380 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.46□□□□□ -2.02
RFX3P48380 MTND2P39-201ENST00000457230 764 ntBASIC2.46□□□□□ -2.02
RFX3P48380 AC087588.1-201ENST00000462203 316 ntBASIC2.46□□□□□ -2.02
RFX3P48380 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.46□□□□□ -2.02
RFX3P48380 AC004924.1-201ENST00000480160 781 ntBASIC2.46□□□□□ -2.02
RFX3P48380 AC022447.3-201ENST00000506865 495 ntBASIC2.46□□□□□ -2.02
RFX3P48380 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.46□□□□□ -2.02
RFX3P48380 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 RPPH1-2P-201ENST00000516688 293 ntBASIC2.46□□□□□ -2.02
RFX3P48380 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.46□□□□□ -2.02
RFX3P48380 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.46□□□□□ -2.02
RFX3P48380 AC009712.1-201ENST00000564938 316 ntBASIC2.46□□□□□ -2.02
RFX3P48380 AP001269.3-201ENST00000588718 329 ntBASIC2.46□□□□□ -2.02
RFX3P48380 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 DUXAP3-201ENST00000603616 594 ntBASIC2.46□□□□□ -2.02
RFX3P48380 OR2AS2P-201ENST00000606902 342 ntBASIC2.46□□□□□ -2.02
RFX3P48380 AL391834.2-201ENST00000609982 546 ntBASIC2.46□□□□□ -2.02
RFX3P48380 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 AC005858.4-201ENST00000623191 700 ntBASIC2.46□□□□□ -2.02
RFX3P48380 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX3P48380 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.46□□□□□ -2.02
RFX3P48380 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RFX3P48380 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RFX3P48380 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
RFX3P48380 SNORA5B-201ENST00000363786 132 ntBASIC2.45□□□□□ -2.02
RFX3P48380 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX3P48380 Y_RNA.465-201ENST00000384293 102 ntBASIC2.45□□□□□ -2.02
RFX3P48380 MIR767-201ENST00000390228 109 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AL139095.1-201ENST00000404326 391 ntBASIC2.45□□□□□ -2.02
RFX3P48380 MIR1284-201ENST00000408337 120 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX3P48380 AL953862.1-201ENST00000423016 168 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.45□□□□□ -2.02
RFX3P48380 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.45□□□□□ -2.02
RFX3P48380 RPS15AP7-201ENST00000439294 405 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AL049734.2-201ENST00000441066 616 ntBASIC2.45□□□□□ -2.02
RFX3P48380 OR10R1P-201ENST00000441524 1141 ntBASIC2.45□□□□□ -2.02
RFX3P48380 CBWD4P-201ENST00000445695 655 ntBASIC2.45□□□□□ -2.02
RFX3P48380 EXOSC3P1-201ENST00000448649 500 ntBASIC2.45□□□□□ -2.02
RFX3P48380 USP9YP10-201ENST00000454868 628 ntBASIC2.45□□□□□ -2.02
RFX3P48380 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.45□□□□□ -2.02
RFX3P48380 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.45□□□□□ -2.02
RFX3P48380 SNORD109B-201ENST00000458961 67 ntBASIC2.45□□□□□ -2.02
RFX3P48380 SNORD109A-201ENST00000459128 67 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AC104563.1-201ENST00000476147 376 ntBASIC2.45□□□□□ -2.02
RFX3P48380 SRIP1-201ENST00000489235 288 ntBASIC2.45□□□□□ -2.02
RFX3P48380 SUMO2P6-201ENST00000505273 288 ntBASIC2.45□□□□□ -2.02
RFX3P48380 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RFX3P48380 CDC42P4-201ENST00000510507 563 ntBASIC2.45□□□□□ -2.02
RFX3P48380 MRPS36P2-201ENST00000512569 299 ntBASIC2.45□□□□□ -2.02
RFX3P48380 MTND5P4-201ENST00000514978 288 ntBASIC2.45□□□□□ -2.02
RFX3P48380 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.45□□□□□ -2.02
RFX3P48380 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX3P48380 OR6C7P-201ENST00000547875 934 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.45□□□□□ -2.02
RFX3P48380 CYCSP2-201ENST00000558168 301 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.45□□□□□ -2.02
RFX3P48380 BBIP1P1-201ENST00000602999 279 ntBASIC2.45□□□□□ -2.02
RFX3P48380 ATP1B3P1-201ENST00000605365 821 ntBASIC2.45□□□□□ -2.02
RFX3P48380 MIR6852-201ENST00000621699 66 ntBASIC2.45□□□□□ -2.02
RFX3P48380 AC103798.2-201ENST00000624292 632 ntBASIC2.45□□□□□ -2.02
RFX3P48380 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.45□□□□□ -2.02
RFX3P48380 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
RFX3P48380 AC011477.1-204ENST00000623416 1325 ntBASIC2.44□□□□□ -2.02
RFX3P48380 OR5J1P-201ENST00000313544 939 ntBASIC2.44□□□□□ -2.02
RFX3P48380 SNORD62.1-201ENST00000362541 86 ntBASIC2.44□□□□□ -2.02
RFX3P48380 RNU4-92P-201ENST00000363783 136 ntBASIC2.44□□□□□ -2.02
RFX3P48380 RNU4-68P-201ENST00000364314 141 ntBASIC2.44□□□□□ -2.02
RFX3P48380 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
RFX3P48380 RNU1-39P-201ENST00000383897 165 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AL109755.1-201ENST00000401791 649 ntBASIC2.44□□□□□ -2.02
RFX3P48380 RNU4-22P-201ENST00000411058 166 ntBASIC2.44□□□□□ -2.02
RFX3P48380 TPMTP3-201ENST00000411928 735 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX3P48380 AL354692.1-201ENST00000423044 315 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC092427.1-202ENST00000430569 476 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX3P48380 SNRPEP7-201ENST00000438350 220 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC002381.1-201ENST00000447049 280 ntBASIC2.44□□□□□ -2.02
RFX3P48380 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX3P48380 RPS15AP27-201ENST00000449183 343 ntBASIC2.44□□□□□ -2.02
RFX3P48380 RPL21P134-201ENST00000453468 483 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AP1S2P1-201ENST00000457344 379 ntBASIC2.44□□□□□ -2.02
RFX3P48380 UBE2DNL-203ENST00000474922 222 ntBASIC2.44□□□□□ -2.02
RFX3P48380 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX3P48380 AC119751.4-201ENST00000507498 357 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC034159.1-201ENST00000513885 583 ntBASIC2.44□□□□□ -2.02
RFX3P48380 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX3P48380 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.44□□□□□ -2.02
RFX3P48380 CKS1BP7-201ENST00000522230 235 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.44□□□□□ -2.02
RFX3P48380 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms