Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC007038.2-201ENST00000608095 740 ntBASIC3□□□□□ -1.93
SOX3P41225 AC006023.2-201ENST00000609916 167 ntBASIC3□□□□□ -1.93
SOX3P41225 BX664608.1-201ENST00000610519 487 ntBASIC3□□□□□ -1.93
SOX3P41225 AC010678.1-201ENST00000614118 713 ntBASIC3□□□□□ -1.93
SOX3P41225 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SOX3P41225 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SOX3P41225 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3□□□□□ -1.93
SOX3P41225 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SOX3P41225 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX3P41225 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SOX3P41225 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SOX3P41225 AC091152.2-201ENST00000591628 2569 ntBASIC2.99□□□□□ -1.93
SOX3P41225 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX3P41225 U3.6-201ENST00000363622 211 ntBASIC2.99□□□□□ -1.93
SOX3P41225 Y_RNA.194-201ENST00000363985 102 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RNU6-76P-201ENST00000384060 104 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RNU6-432P-201ENST00000384196 109 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RNU4-65P-201ENST00000410473 140 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RNU6-248P-201ENST00000410720 107 ntBASIC2.99□□□□□ -1.93
SOX3P41225 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 AL353678.1-201ENST00000422735 741 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 AC012498.1-201ENST00000424037 437 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.99□□□□□ -1.93
SOX3P41225 AC024082.2-201ENST00000434771 238 ntBASIC2.99□□□□□ -1.93
SOX3P41225 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SOX3P41225 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX3P41225 AL031667.1-201ENST00000440222 725 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RPL26P6-201ENST00000440913 438 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AL022238.1-201ENST00000442557 355 ntBASIC2.99□□□□□ -1.93
SOX3P41225 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX3P41225 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 RPL23AP31-201ENST00000456160 467 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RNU7-59P-201ENST00000459101 61 ntBASIC2.99□□□□□ -1.93
SOX3P41225 VN1R17P-201ENST00000472048 1090 ntBASIC2.99□□□□□ -1.93
SOX3P41225 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX3P41225 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SOX3P41225 VN1R104P-201ENST00000505115 1009 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX3P41225 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SOX3P41225 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
SOX3P41225 RNA5SP380-201ENST00000517190 98 ntBASIC2.99□□□□□ -1.93
SOX3P41225 SNORA31.22-201ENST00000517204 135 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC107934.1-201ENST00000522215 217 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AP003181.2-201ENST00000528941 181 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 MED28P6-201ENST00000558776 231 ntBASIC2.99□□□□□ -1.93
SOX3P41225 ZNF192P1-203ENST00000565888 810 ntBASIC2.99□□□□□ -1.93
SOX3P41225 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.99□□□□□ -1.93
SOX3P41225 MIR3146-201ENST00000580367 79 ntBASIC2.99□□□□□ -1.93
SOX3P41225 MIR3200-201ENST00000580767 85 ntBASIC2.99□□□□□ -1.93
SOX3P41225 HMGN1P30-201ENST00000589286 268 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC040904.1-201ENST00000590850 223 ntBASIC2.99□□□□□ -1.93
SOX3P41225 KC877982.1-201ENST00000602313 470 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC015871.2-201ENST00000603605 948 ntBASIC2.99□□□□□ -1.93
SOX3P41225 SEPT7P9-203ENST00000604116 343 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AP001330.4-201ENST00000604350 154 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC121334.2-201ENST00000605387 271 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC108747.1-201ENST00000609508 535 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC245517.5-201ENST00000611529 162 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC131902.3-201ENST00000611767 581 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC100793.4-201ENST00000613683 429 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AP001506.1-201ENST00000615444 211 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC092656.1-203ENST00000624134 423 ntBASIC2.99□□□□□ -1.93
SOX3P41225 MIR4275-201ENST00000636486 87 ntBASIC2.99□□□□□ -1.93
SOX3P41225 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
SOX3P41225 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SOX3P41225 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.99□□□□□ -1.93
SOX3P41225 AC092104.1-201ENST00000497346 1441 ntBASIC2.99□□□□□ -1.93
SOX3P41225 DDX10P1-201ENST00000448545 1933 ntBASIC2.99□□□□□ -1.93
SOX3P41225 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.99□□□□□ -1.93
SOX3P41225 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SOX3P41225 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 AC005183.1-201ENST00000603687 1979 ntBASIC2.98□□□□□ -1.93
SOX3P41225 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SOX3P41225 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX3P41225 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SOX3P41225 RNU5A-8P-201ENST00000364102 114 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 RPL21P3-201ENST00000395517 478 ntBASIC2.98□□□□□ -1.93
SOX3P41225 DEFB108C-201ENST00000400154 252 ntBASIC2.98□□□□□ -1.93
SOX3P41225 RNA5SP229-201ENST00000410809 99 ntBASIC2.98□□□□□ -1.93
SOX3P41225 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.98□□□□□ -1.93
SOX3P41225 AL589872.1-201ENST00000426602 288 ntBASIC2.98□□□□□ -1.93
SOX3P41225 TIMM9P1-201ENST00000436122 256 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 MTCO2P7-201ENST00000446518 666 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.98□□□□□ -1.93
SOX3P41225 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 AC146507.2-201ENST00000460608 476 ntBASIC2.98□□□□□ -1.93
SOX3P41225 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC109925.1-201ENST00000478069 331 ntBASIC2.98□□□□□ -1.93
SOX3P41225 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.98□□□□□ -1.93
SOX3P41225 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms