Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNFP41002 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.7□□□□□ -1.66
CCNFP41002 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCNFP41002 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
CCNFP41002 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 AC138393.1-203ENST00000327086 343 ntBASIC4.69□□□□□ -1.66
CCNFP41002 SNORD3E-201ENST00000362899 217 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RNU6-335P-201ENST00000364563 113 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RNU6-1303P-201ENST00000364841 107 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RNA5SP235-201ENST00000365411 114 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RNU6-629P-201ENST00000384061 103 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RNU6-214P-201ENST00000384130 107 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RNU6-196P-201ENST00000384315 107 ntBASIC4.69□□□□□ -1.66
CCNFP41002 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 RN7SKP167-201ENST00000411047 285 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RN7SKP216-201ENST00000411050 312 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RPL21P90-201ENST00000415692 466 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.69□□□□□ -1.66
CCNFP41002 AC079780.1-201ENST00000428259 207 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC236972.1-201ENST00000433225 199 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.69□□□□□ -1.66
CCNFP41002 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNFP41002 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.69□□□□□ -1.66
CCNFP41002 PRDX3P3-201ENST00000447765 522 ntBASIC4.69□□□□□ -1.66
CCNFP41002 RPL37P6-201ENST00000460682 294 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC010469.1-201ENST00000463864 576 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AP000926.1-201ENST00000479573 241 ntBASIC4.69□□□□□ -1.66
CCNFP41002 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNFP41002 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.69□□□□□ -1.66
CCNFP41002 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.69□□□□□ -1.66
CCNFP41002 AC108043.1-201ENST00000512696 574 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.69□□□□□ -1.66
CCNFP41002 Y_RNA.670-201ENST00000516255 105 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AF186190.1-201ENST00000517470 480 ntBASIC4.69□□□□□ -1.66
CCNFP41002 CYCSP27-201ENST00000527643 293 ntBASIC4.69□□□□□ -1.66
CCNFP41002 MIR3934-201ENST00000579806 107 ntBASIC4.69□□□□□ -1.66
CCNFP41002 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 AC022726.1-201ENST00000587475 207 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC002044.1-201ENST00000606707 158 ntBASIC4.69□□□□□ -1.66
CCNFP41002 FAM27B-201ENST00000610601 213 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC010205.1-201ENST00000616668 449 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 AC087385.3-201ENST00000620477 187 ntBASIC4.69□□□□□ -1.66
CCNFP41002 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.69□□□□□ -1.66
CCNFP41002 AL732372.2-225ENST00000642124 456 ntBASIC4.69□□□□□ -1.66
CCNFP41002 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNFP41002 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CCNFP41002 MAPK10-303ENST00000641324 3959 ntBASIC4.69□□□□□ -1.66
CCNFP41002 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.69□□□□□ -1.66
CCNFP41002 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCNFP41002 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.69□□□□□ -1.66
CCNFP41002 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CCNFP41002 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCNFP41002 MTND5P1-201ENST00000445440 1375 ntBASIC4.68□□□□□ -1.66
CCNFP41002 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 Y_RNA.5-201ENST00000362334 102 ntBASIC4.68□□□□□ -1.66
CCNFP41002 RNA5SP151-201ENST00000365632 117 ntBASIC4.68□□□□□ -1.66
CCNFP41002 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 AC117470.1-201ENST00000381974 330 ntBASIC4.68□□□□□ -1.66
CCNFP41002 Y_RNA.404-201ENST00000383978 102 ntBASIC4.68□□□□□ -1.66
CCNFP41002 RNU6-95P-201ENST00000384697 107 ntBASIC4.68□□□□□ -1.66
CCNFP41002 RNU6-817P-201ENST00000391083 104 ntBASIC4.68□□□□□ -1.66
CCNFP41002 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCNFP41002 Y_RNA.594-201ENST00000410373 140 ntBASIC4.68□□□□□ -1.66
CCNFP41002 RPL37P18-201ENST00000411602 243 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.68□□□□□ -1.66
CCNFP41002 RPL21P91-201ENST00000429231 479 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.68□□□□□ -1.66
CCNFP41002 RPL12P3-201ENST00000440080 396 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.68□□□□□ -1.66
CCNFP41002 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.68□□□□□ -1.66
CCNFP41002 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.68□□□□□ -1.66
CCNFP41002 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.68□□□□□ -1.66
CCNFP41002 RPL23AP2-201ENST00000471227 466 ntBASIC4.68□□□□□ -1.66
CCNFP41002 RN7SL41P-201ENST00000476144 297 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC026801.1-201ENST00000497178 464 ntBASIC4.68□□□□□ -1.66
CCNFP41002 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms