Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MIR514A1-201ENST00000385133 98 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 SNORA77-201ENST00000408716 125 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 TOMM22P1-201ENST00000418578 312 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AL592045.1-201ENST00000429867 352 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC12P31275 HIGD1AP11-201ENST00000438361 280 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AL137792.2-201ENST00000443484 235 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC12P31275 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 SCARNA10-201ENST00000459255 330 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 RN7SL441P-201ENST00000492388 296 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AC026979.1-201ENST00000492525 396 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AC097473.1-201ENST00000508142 408 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 MTND3P25-201ENST00000509243 135 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 VWA8P1-201ENST00000510889 176 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 APOOP4-201ENST00000513530 597 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 Vault.1-201ENST00000516474 102 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AC022634.1-201ENST00000520765 532 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXC12P31275 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC12P31275 PARP1P2-201ENST00000556806 195 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 MIR5096-201ENST00000583713 70 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 MIR548AC-201ENST00000585049 88 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 AL512643.1-201ENST00000635735 524 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC12P31275 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC12P31275 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC12P31275 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC12P31275 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC12P31275 AC008725.1-201ENST00000605123 2263 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC12P31275 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC12P31275 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC12P31275 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC12P31275 SNORD3E-201ENST00000362899 217 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 RNA5SP167-201ENST00000365461 116 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC12P31275 SNORA75B-201ENST00000384053 137 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 Y_RNA.459-201ENST00000384251 102 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 Y_RNA.473-201ENST00000384333 102 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 RNU6-95P-201ENST00000384697 107 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 RNU6-1050P-201ENST00000410388 107 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC093414.1-201ENST00000434712 514 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 RHOT1P3-201ENST00000436571 331 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC12P31275 RPS29P9-201ENST00000440360 171 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC12P31275 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 CYCSP34-201ENST00000458172 304 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC087588.1-201ENST00000462203 316 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC103987.1-201ENST00000473394 348 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 AC084198.1-201ENST00000477747 402 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HOXC12P31275 AC020593.1-201ENST00000507399 299 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC096745.1-201ENST00000509945 370 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC12P31275 RNA5SP43-201ENST00000516559 110 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 Y_RNA.708-201ENST00000516950 96 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 RNA5SP471-201ENST00000516971 106 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC12P31275 AC063950.1-201ENST00000552036 308 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 NUTF2P8-201ENST00000604593 363 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AL354984.3-201ENST00000604803 325 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AP000654.2-201ENST00000605633 586 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC009229.3-201ENST00000608056 282 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 SNORD91B-202ENST00000608459 222 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC12P31275 AL031601.2-202ENST00000622650 282 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AC092608.2-201ENST00000624427 218 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC12P31275 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC12P31275 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
HOXC12P31275 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC12P31275 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HOXC12P31275 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC12P31275 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
HOXC12P31275 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 AC007685.1-201ENST00000329806 452 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 RNA5SP428-201ENST00000365129 132 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC12P31275 RNU6-1181P-201ENST00000384191 106 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC12P31275 HSPD1P21-201ENST00000436541 245 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AC112498.1-201ENST00000444401 332 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AL360271.2-201ENST00000447710 161 ntBASIC4.38□□□□□ -1.71
HOXC12P31275 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms