Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNU6-534P-201ENST00000364877 106 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AL024474.1-201ENST00000404655 591 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 RNU4-65P-201ENST00000410473 140 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA11P31270 AL353777.1-201ENST00000425552 326 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA11P31270 AL451074.3-201ENST00000437709 472 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 AC002381.1-201ENST00000447049 280 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 NFU1P2-201ENST00000448700 469 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 MTCO3P20-201ENST00000454926 688 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA11P31270 RPS3AP14-201ENST00000483907 780 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC069439.1-201ENST00000494739 167 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 Y_RNA.672-201ENST00000516289 104 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 RNU6-358P-201ENST00000516564 75 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA11P31270 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA11P31270 AP003072.2-201ENST00000527756 676 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA11P31270 AL121576.1-201ENST00000556055 276 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AL157394.1-201ENST00000562983 1224 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA11P31270 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXA11P31270 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 AC020914.4-201ENST00000597690 277 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 RPL23AP92-201ENST00000603609 255 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC007363.1-201ENST00000604736 620 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AL365503.1-201ENST00000605247 905 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 AC008945.2-201ENST00000606056 604 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 RNU6-87P-201ENST00000607561 108 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXA11P31270 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXA11P31270 AL049780.3-201ENST00000624612 1583 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXA11P31270 AC092447.10-201ENST00000620607 1652 ntBASIC3.71□□□□□ -1.82
HOXA11P31270 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA11P31270 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA11P31270 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA11P31270 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXA11P31270 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HOXA11P31270 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA11P31270 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA11P31270 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA11P31270 GNG5P1-201ENST00000255500 204 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HOXA11P31270 Y_RNA.46-201ENST00000362695 102 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 RNA5SP197-201ENST00000363357 119 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 RNU6-730P-201ENST00000383954 104 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC016769.3-201ENST00000396562 315 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 HMGN1P24-201ENST00000412282 298 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 MTATP6P27-201ENST00000416987 621 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXA11P31270 AL139413.1-201ENST00000421309 217 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA11P31270 MTCO2P5-201ENST00000422621 426 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 MTND4P28-201ENST00000426217 387 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AL035410.1-201ENST00000427409 427 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC073464.1-201ENST00000429823 534 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA11P31270 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 Z75741.1-201ENST00000446793 314 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC115115.1-201ENST00000449927 248 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 C1DP4-201ENST00000455429 424 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 BX322784.1-201ENST00000455793 1077 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA11P31270 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA11P31270 RBM43P1-201ENST00000476891 1081 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC092989.1-201ENST00000481235 277 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC026427.2-201ENST00000506228 536 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 SNORA74D-201ENST00000516404 141 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 Y_RNA.693-201ENST00000516641 110 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 RN7SKP57-201ENST00000517248 293 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 CBX3P7-201ENST00000532876 502 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA11P31270 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA11P31270 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA11P31270 AC099489.2-201ENST00000574976 260 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC008752.3-201ENST00000588113 712 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC006557.5-201ENST00000603126 811 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 HMGB1P50-201ENST00000605814 607 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC011816.2-201ENST00000607089 556 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC012150.2-201ENST00000621300 544 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA11P31270 AC099654.5-201ENST00000636479 350 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA11P31270 AC002546.1-201ENST00000588041 2504 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 AC097714.1-201ENST00000511272 1647 ntBASIC3.7□□□□□ -1.82
HOXA11P31270 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HOXA11P31270 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA11P31270 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms