Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNGA1P29973 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNGA1P29973 RNU6-1090P-201ENST00000364065 94 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 MIR34B-201ENST00000385076 84 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 RNU6-1158P-201ENST00000391167 107 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 OR51A5P-201ENST00000415429 942 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 MRPS10P2-201ENST00000431226 381 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 RPL7P54-201ENST00000438336 674 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.53□□□□□ -1.68
CNGA1P29973 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.53□□□□□ -1.68
CNGA1P29973 MRPS17P3-201ENST00000465453 385 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 RPL36AP51-201ENST00000487216 318 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 SNORA31.3-201ENST00000516029 96 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 SCARNA15.2-201ENST00000516409 127 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 IGKV2D-19-201ENST00000523346 262 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 AC109635.3-201ENST00000529536 185 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 AC091516.1-201ENST00000549191 703 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.53□□□□□ -1.68
CNGA1P29973 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.53□□□□□ -1.68
CNGA1P29973 AC092325.1-201ENST00000566449 554 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AC022968.1-201ENST00000567372 442 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AC006504.3-201ENST00000586818 523 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AC010591.1-201ENST00000603941 649 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AL049634.3-201ENST00000604968 457 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AC005344.1-201ENST00000613391 459 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 AL589994.2-201ENST00000621124 579 ntBASIC4.53□□□□□ -1.68
CNGA1P29973 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.53□□□□□ -1.68
CNGA1P29973 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNGA1P29973 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNGA1P29973 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNGA1P29973 OR4G2P-202ENST00000641004 1759 ntBASIC4.53□□□□□ -1.69
CNGA1P29973 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.52□□□□□ -1.69
CNGA1P29973 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNGA1P29973 AC032011.1-201ENST00000611703 1549 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.52□□□□□ -1.69
CNGA1P29973 RNU6-483P-201ENST00000384088 108 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 RPL21P17-201ENST00000397467 475 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 MIR1277-201ENST00000408536 78 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 SNORA3.3-201ENST00000408712 125 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 MIR1290-201ENST00000408735 78 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 RPS29P4-201ENST00000414733 161 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 MRPL50P2-201ENST00000416821 482 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNGA1P29973 RPL27AP8-201ENST00000424277 446 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 AC091390.3-201ENST00000426478 338 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 ELOCP14-201ENST00000428070 331 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.52□□□□□ -1.69
CNGA1P29973 AL606489.2-201ENST00000433886 234 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 ELOCP7-201ENST00000439968 331 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNGA1P29973 HMGN1P11-201ENST00000508668 303 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.52□□□□□ -1.69
CNGA1P29973 SNORA40.12-201ENST00000516329 111 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 RNA5SP309-201ENST00000516670 106 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 RNA5SP468-201ENST00000516782 93 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.52□□□□□ -1.69
CNGA1P29973 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.52□□□□□ -1.69
CNGA1P29973 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.52□□□□□ -1.69
CNGA1P29973 AC012417.1-201ENST00000582307 1039 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 AP001029.3-201ENST00000588063 596 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 AC007619.2-201ENST00000605743 379 ntBASIC4.52□□□□□ -1.69
CNGA1P29973 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.52□□□□□ -1.69
CNGA1P29973 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CNGA1P29973 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNGA1P29973 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC018555.1-201ENST00000567548 1980 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.51□□□□□ -1.69
CNGA1P29973 Y_RNA.381-201ENST00000365666 102 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNGA1P29973 RNU6-946P-201ENST00000383878 107 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 SNORA24.1-201ENST00000384401 135 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNGA1P29973 HSPE1P26-201ENST00000405341 275 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AL513331.1-201ENST00000411908 397 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNGA1P29973 JKAMPP1-201ENST00000413804 919 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AC114491.1-201ENST00000416095 246 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 NDUFB4P7-201ENST00000423198 363 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 MTCO1P20-201ENST00000425366 358 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AL139415.2-201ENST00000431968 163 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.51□□□□□ -1.69
CNGA1P29973 RBMX2P4-201ENST00000441256 376 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNGA1P29973 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.51□□□□□ -1.69
CNGA1P29973 RNU7-63P-201ENST00000459054 62 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 RPL21P104-201ENST00000464143 478 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 MTCO3P38-201ENST00000468910 766 ntBASIC4.51□□□□□ -1.69
CNGA1P29973 RN7SL585P-201ENST00000470538 280 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms