Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR558-201ENST00000384920 94 ntBASIC5.43□□□□□ -1.54
RXRBP28702 PRRC2CP1-201ENST00000404428 159 ntBASIC5.43□□□□□ -1.54
RXRBP28702 AL133384.1-201ENST00000412744 351 ntBASIC5.43□□□□□ -1.54
RXRBP28702 EIF4HP2-201ENST00000424380 563 ntBASIC5.43□□□□□ -1.54
RXRBP28702 AC096632.1-201ENST00000427395 310 ntBASIC5.43□□□□□ -1.54
RXRBP28702 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.43□□□□□ -1.54
RXRBP28702 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.43□□□□□ -1.54
RXRBP28702 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.43□□□□□ -1.54
RXRBP28702 SNORA25.10-201ENST00000515926 124 ntBASIC5.43□□□□□ -1.54
RXRBP28702 snoU109.6-201ENST00000516831 118 ntBASIC5.43□□□□□ -1.54
RXRBP28702 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.43□□□□□ -1.54
RXRBP28702 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.43□□□□□ -1.54
RXRBP28702 AC018552.3-201ENST00000567416 561 ntBASIC5.43□□□□□ -1.54
RXRBP28702 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.43□□□□□ -1.54
RXRBP28702 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.43□□□□□ -1.54
RXRBP28702 AC110743.1-201ENST00000584870 478 ntBASIC5.43□□□□□ -1.54
RXRBP28702 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.43□□□□□ -1.54
RXRBP28702 PRR13P7-201ENST00000605538 430 ntBASIC5.43□□□□□ -1.54
RXRBP28702 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.43□□□□□ -1.54
RXRBP28702 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.43□□□□□ -1.54
RXRBP28702 AL049641.1-201ENST00000441055 1948 ntBASIC5.42□□□□□ -1.54
RXRBP28702 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RXRBP28702 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RXRBP28702 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 Y_RNA.212-201ENST00000364177 102 ntBASIC5.42□□□□□ -1.54
RXRBP28702 SNORA62.1-201ENST00000364287 154 ntBASIC5.42□□□□□ -1.54
RXRBP28702 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RXRBP28702 Y_RNA.482-201ENST00000384377 111 ntBASIC5.42□□□□□ -1.54
RXRBP28702 RNU6-441P-201ENST00000384545 106 ntBASIC5.42□□□□□ -1.54
RXRBP28702 UBE2V1P2-201ENST00000397758 440 ntBASIC5.42□□□□□ -1.54
RXRBP28702 RPL21P67-201ENST00000402896 478 ntBASIC5.42□□□□□ -1.54
RXRBP28702 MIR1271-201ENST00000408537 86 ntBASIC5.42□□□□□ -1.54
RXRBP28702 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.42□□□□□ -1.54
RXRBP28702 ARL5AP1-201ENST00000418991 388 ntBASIC5.42□□□□□ -1.54
RXRBP28702 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 AC008267.5-201ENST00000424928 265 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC096644.2-201ENST00000429278 159 ntBASIC5.42□□□□□ -1.54
RXRBP28702 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 AC005019.1-201ENST00000436455 431 ntBASIC5.42□□□□□ -1.54
RXRBP28702 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RXRBP28702 RPL35AP21-201ENST00000437667 333 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.42□□□□□ -1.54
RXRBP28702 AC093156.1-201ENST00000440382 670 ntBASIC5.42□□□□□ -1.54
RXRBP28702 RPS24P13-201ENST00000442520 397 ntBASIC5.42□□□□□ -1.54
RXRBP28702 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 MTND1P17-201ENST00000448961 204 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.42□□□□□ -1.54
RXRBP28702 RN7SL807P-201ENST00000470923 297 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 AC020893.1-201ENST00000502452 580 ntBASIC5.42□□□□□ -1.54
RXRBP28702 MRPS35P2-201ENST00000508242 191 ntBASIC5.42□□□□□ -1.54
RXRBP28702 RPL39P5-202ENST00000512505 151 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC009812.2-201ENST00000517657 457 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.42□□□□□ -1.54
RXRBP28702 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.42□□□□□ -1.54
RXRBP28702 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 AC005357.1-201ENST00000588399 301 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC115085.1-201ENST00000588924 229 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AL355816.1-201ENST00000607951 118 ntBASIC5.42□□□□□ -1.54
RXRBP28702 Z82243.1-201ENST00000609432 473 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 AC107871.2-201ENST00000612894 502 ntBASIC5.42□□□□□ -1.54
RXRBP28702 AC012409.4-201ENST00000612923 249 ntBASIC5.42□□□□□ -1.54
RXRBP28702 PNPT1P2-201ENST00000456768 2050 ntBASIC5.42□□□□□ -1.54
RXRBP28702 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RXRBP28702 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RXRBP28702 AL049781.1-201ENST00000623195 3585 ntBASIC5.42□□□□□ -1.54
RXRBP28702 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.42□□□□□ -1.54
RXRBP28702 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RXRBP28702 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.41□□□□□ -1.54
RXRBP28702 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.41□□□□□ -1.54
RXRBP28702 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RXRBP28702 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RXRBP28702 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RXRBP28702 RNU6-1029P-201ENST00000384109 107 ntBASIC5.41□□□□□ -1.54
RXRBP28702 RNY1P14-201ENST00000384426 108 ntBASIC5.41□□□□□ -1.54
RXRBP28702 MIR649-201ENST00000384843 97 ntBASIC5.41□□□□□ -1.54
RXRBP28702 RNU2-29P-201ENST00000410423 189 ntBASIC5.41□□□□□ -1.54
RXRBP28702 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.41□□□□□ -1.54
RXRBP28702 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.41□□□□□ -1.54
RXRBP28702 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.41□□□□□ -1.54
RXRBP28702 RNU7-182P-201ENST00000459009 62 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC110794.1-201ENST00000505816 425 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.41□□□□□ -1.54
RXRBP28702 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.41□□□□□ -1.54
RXRBP28702 RPS27AP18-201ENST00000515536 459 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.41□□□□□ -1.54
RXRBP28702 OR4P1P-201ENST00000530808 1136 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.41□□□□□ -1.54
RXRBP28702 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.41□□□□□ -1.54
RXRBP28702 MTCO3P23-201ENST00000561363 289 ntBASIC5.41□□□□□ -1.54
RXRBP28702 AC015912.2-201ENST00000571053 181 ntBASIC5.41□□□□□ -1.54
RXRBP28702 MIR4703-201ENST00000577728 79 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms